RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 PAQR5Q9NXK6 330 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-204ENST00000586558 RPS6KB2Q9UBS0 482 aa17.27■□□□□ 0.36
DDX39A-204ENST00000586558 CHRNA9Q9UGM1 479 aa17.27■□□□□ 0.36
DDX39A-204ENST00000586558 RPS6KA6Q9UK32 745 aa17.27■□□□□ 0.36
DDX39A-204ENST00000586558 ESPL1Q14674 2120 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 ZGRF1Q86YA3 2104 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 TMEM229AB2RXF0 380 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 PYCARD-AS1I3L0S3 204 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 M0R3H8 397 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 ARPC2O15144 300 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 EFNA2O43921 213 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 ZNF682O95780 498 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SERPINA1P01009 418 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 TACR3P29371 465 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 CLK1P49759 484 aaKnown RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 CLDN20P56880 219 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 RPS3AP61247 264 aaKnown RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 HOXC5Q00444 222 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SRYQ05066 204 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 ACSF3Q4G176 576 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SWT1Q5T5J6 900 aaKnown RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 C1orf185Q5T7R7 199 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 CBLL1Q75N03 491 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 OR6T1Q8NGN1 323 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 DNAJA4Q8WW22 397 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 TPD52L3Q96J77 140 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 PCDHAC1Q9H158 963 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 TMEM185BQ9H7F4 350 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 C12orf10Q9HB07 376 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 TMEM27Q9HBJ8 222 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SH3BGRL2Q9UJC5 107 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 OSGIN1Q9UJX0 560 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SAMD4AQ9UPU9 718 aaKnown RBP17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SLC5A6Q9Y289 635 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 SH3GLB1Q9Y371 365 aa17.26■□□□□ 0.35
DDX39A-204ENST00000586558 HEATR5AQ86XA9 2040 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 TMED7-TICAM2A0A0A6YYA0 188 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 EBAG9O00559 213 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 CCL21O00585 134 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 ADAMDEC1O15204 470 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 SEC14L5O43304 696 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 FREM3P0C091 2139 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 IL11P20809 199 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 CXCR1P25024 350 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 HTR2AP28223 471 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 PER3P56645 1201 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 PDSS1Q5T2R2 415 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 TMEM211Q6ICI0 200 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 POMZP3Q6PJE2 187 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 B3GNT6Q6ZMB0 384 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 CHMP1BQ7LBR1 199 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 CARM1Q86X55 608 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 ADGRG3Q86Y34 549 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 OR2V1Q8NHB1 315 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 PHF10Q8WUB8 498 aaKnown RBP17.25■□□□□ 0.35
DDX39A-204ENST00000586558 GEMIN6Q8WXD5 167 aaKnown RBP17.25■□□□□ 0.35
DDX39A-204ENST00000586558 C3orf49Q96BT1 292 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 ADGRG7Q96K78 797 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 UCN2Q96RP3 112 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 MCHR1Q99705 422 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 TUBA1CQ9BQE3 449 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 THTPAQ9BU02 230 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 POLR2J2Q9GZM3 115 aaKnown RBP17.25■□□□□ 0.35
DDX39A-204ENST00000586558 POLR2J3Q9H1A7 115 aaKnown RBP17.25■□□□□ 0.35
DDX39A-204ENST00000586558 DCAF13Q9NV06 445 aaKnown RBP17.25■□□□□ 0.35
DDX39A-204ENST00000586558 ALKBH4Q9NXW9 302 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 SELENONQ9NZV5 590 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 ACTR3BQ9P1U1 418 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 MEMO1Q9Y316 297 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 TMED7Q9Y3B3 224 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 PCNX3Q9H6A9 2034 aa17.25■□□□□ 0.35
DDX39A-204ENST00000586558 A0A1B0GWA3 101 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 CD8B2A6NJW9 211 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 EIF1AYO14602 144 aaKnown RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 LRRTM2O43300 516 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 ZNF208O43345 1280 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 DNAJC8O75937 253 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 PNMTP11086 282 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 SLC7A1P30825 629 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 SFTPDP35247 375 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 MSX2P35548 267 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 SUCLG1P53597 346 aaKnown RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 CLDN15P56746 228 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 KCNC4Q03721 635 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 TRIM25Q14258 630 aaKnown RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 NPTX1Q15818 432 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 CTU2Q2VPK5 515 aaKnown RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 IFI44LQ53G44 452 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 SYT14P1Q58G82 188 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 NSUN5P2Q63ZY6 315 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 ZNF613Q6PF04 617 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 ULK3Q6PHR2 472 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 C3P1Q6ZMU1 363 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 CCDC121Q6ZUS5 278 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 ADGRE4PQ86SQ3 457 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 ATG4DQ86TL0 474 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 LACC1Q8IV20 430 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 VANGL1Q8TAA9 524 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-204ENST00000586558 NSMCE2Q96MF7 247 aa17.24■□□□□ 0.35
DDX39A-204ENST00000586558 DMRTA2Q96SC8 542 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms