RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 C1orf94Q6P1W5 598 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 ASB18Q6ZVZ8 466 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 MBOAT2Q6ZWT7 520 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 USP51Q70EK9 711 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 DEPDC4Q8N2C3 294 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 CLIP4Q8N3C7 705 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 POGLUT1Q8NBL1 392 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 OR10G3Q8NGC4 313 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 OR4K5Q8NGD3 323 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 OR4C3Q8NH37 302 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 SLC7A13Q8TCU3 470 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 ASB15Q8WXK1 588 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 TMEM234Q8WY98 164 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 ZG16BQ96DA0 208 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 SCMH1Q96GD3 660 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 NODALQ96S42 347 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 FEVQ99581 238 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 PITX2Q99697 317 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 UTP23Q9BRU9 249 aaKnown RBP11.52□□□□□ -0.57
VMP1-202ENST00000585847 VNN3Q9NY84 501 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 LRFN1Q9P244 771 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 BLOC1S6Q9UL45 172 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 HRH3Q9Y5N1 445 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 CHCHD2Q9Y6H1 151 aaPredicted RBP11.52□□□□□ -0.57
VMP1-202ENST00000585847 NCKAP5O14513 1909 aa11.52□□□□□ -0.57
VMP1-202ENST00000585847 A0A0G2JMM0 328 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 A0A1W2PPB8 328 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 A0A1W2PRS3 328 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 C7orf72A4D263 438 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 KIR3DP1A8MWS1 328 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 B4DXG7 233 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 M0R3G1 203 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 FADS1O60427 444 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 ICOSLGO75144 302 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 DIRAS1O95057 198 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 LINGO3P0C6S8 592 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CCL3P10147 92 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 RYKP34925 604 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CYB561P49447 251 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CTBP2P56545 445 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CSNK2BP67870 215 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 ARG2P78540 354 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 ADARB1P78563 741 aaKnown RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 TLE1Q04724 770 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 GANABQ14697 944 aaKnown RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 OR1Q1Q15612 314 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 OR1C1Q15619 314 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 NADK2Q4G0N4 442 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 SLC30A6Q6NXT4 461 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 ZNF730Q6ZMV8 503 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 TSPYL5Q86VY4 417 aaPredicted RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 CYP4Z2PQ8N1L4 340 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 Q8NA96 180 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 AQP11Q8NBQ7 271 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 OR4D11Q8NGI4 311 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 OR5W2Q8NH69 310 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 GNPDA2Q8TDQ7 276 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 PAQR8Q8TEZ7 354 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 ST8SIA1Q92185 356 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CNOT9Q92600 299 aaKnown RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 ZNF426Q9BUY5 554 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 RTN4RQ9BZR6 473 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 UCK2Q9BZX2 261 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 SLC25A18Q9H1K4 315 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 MAN2C1Q9NTJ4 1040 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 DEPPQ9NTK1 212 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 RLIMQ9NVW2 624 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 HPF1Q9NWY4 346 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 CNIH4Q9P003 139 aa11.51□□□□□ -0.57
VMP1-202ENST00000585847 TMEFF2Q9UIK5 374 aaPredicted RBP11.51□□□□□ -0.57
VMP1-202ENST00000585847 TLN1Q9Y490 2541 aaKnown RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 TRBV4-1A0A0J9YWV2 114 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 PINLYPA6NC86 204 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 MAGEA13PA6NCF6 341 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 CPSF4LA6NMK7 179 aaKnown RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 ETV2O00321 342 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 DLGAP1O14490 977 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 SEMA7AO75326 666 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 BCAS1O75363 584 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 UBTFL6P0CB48 400 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 OSMP13725 252 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 CASRP41180 1078 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 ACAA2P42765 397 aaKnown RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 SLC1A3P43003 542 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 DAPP51397 102 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 P2RX1P51575 399 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 IST1P53990 364 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 OC90Q02509 493 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 SRSF1Q07955 248 aaKnown RBP eCLIP11.5□□□□□ -0.57
VMP1-202ENST00000585847 NPRL3Q12980 569 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 TSPAN31Q12999 210 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 PDK3Q15120 406 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 PLEKHN1Q494U1 663 aaPredicted RBP11.5□□□□□ -0.57
VMP1-202ENST00000585847 ALG10BQ5I7T1 473 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 SLC6A19Q695T7 634 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 BICRALQ6AI39 1079 aa11.5□□□□□ -0.57
VMP1-202ENST00000585847 PGBD2Q6P3X8 592 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms