RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLA2Q9H6Q3 261 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 UBTD1Q9HAC8 227 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ACKR4Q9NPB9 350 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 SPAG4Q9NPE6 437 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS16Q9NQE7 514 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 C14orf105Q9NVL8 296 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZDHHC2Q9UIJ5 367 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CLEC4AQ9UMR7 237 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR83OSQ9Y284 106 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 FADS3Q9Y5Q0 445 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 WDFY4Q6ZS81 3184 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 CKAP5Q14008 2032 aa1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF106Q9H2Y7 1883 aaKnown RBP1.73□□□□□ -2.13
SMCHD1-211ENST00000584897 LOC285095A0A1B0GVY8 99 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM150BA6NC51 233 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SYCE1LA8MT33 242 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 E7ENQ6 273 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NEDD8-MDP1E9PL57 170 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LMO7DNF2Z398 122 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 K7EQM0 130 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NDUFAB1O14561 156 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DUX1O43812 170 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SRPX2O60687 465 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ENTPD5O75356 428 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CPNE6O95741 557 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LCATP04180 440 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HMBSP08397 361 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KRT16P08779 473 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DANCRP0C864 163 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DBTP11182 482 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ADRB3P13945 408 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TSPAN8P19075 237 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CRABP2P29373 138 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PBLDP30039 288 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 HMGCLP35914 325 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRIM23P36406 574 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 APOBEC1P41238 236 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RANBP1P43487 201 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 AMTP48728 403 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SELENOVP59797 346 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PFN3P60673 137 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRA2BP62995 288 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MFAP5Q13361 173 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 DDX39BQ13838 428 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SSX2Q16385 188 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PAPPA-AS1Q5QFB9 102 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 BEND6Q5SZJ8 279 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM45BPQ6NSW5 357 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PRMT9Q6P2P2 845 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR59Q6PJI9 974 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM198BQ6UWH4 519 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CEACAM20Q6UY09 585 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SYVN1Q86TM6 617 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM131BQ86XD5 332 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 RAB43Q86YS6 212 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PGBD5Q8N414 524 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ARL14Q8N4G2 192 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 L3MBTL4Q8NA19 623 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 STXBP6Q8NFX7 210 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR52E1Q8NGJ3 308 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 WDR36Q8NI36 951 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM81AQ8TBF8 368 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 FAM45AQ8TCE6 357 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MAPK15Q8TD08 544 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 LMX1AQ8TE12 382 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KIAA1143Q96AT1 154 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NUS1Q96E22 293 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ALG14Q96F25 216 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SDSLQ96GA7 329 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 OR2M4Q96R27 311 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF607Q96SK3 696 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CPXM1Q96SM3 734 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 NKX3-1Q99801 234 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PSD2Q9BQI7 771 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C11orf70Q9BRQ4 267 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC25A33Q9BSK2 321 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ALG12Q9BV10 488 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 BARHL1Q9BZE3 327 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 EHD1Q9H4M9 534 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 KIR3DX1Q9H7L2 352 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SEC14L3Q9UDX4 400 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SLC17A4Q9Y2C5 497 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 UTP11Q9Y3A2 253 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 ZNF638Q14966 1978 aaKnown RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 hCG_1818297A0A087WSY0 165 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 IGHV4-28A0A0C4DH34 117 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0J9YYE9 177 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 A0A0U1RQJ8 604 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TMEM129A0AVI4 362 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SMCO3A2RU48 225 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 SHISA7A6NL88 538 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 C17orf105B2RV13 164 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 K7EQS6 105 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CDX4O14627 284 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TLX3O43711 291 aaPredicted RBP1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 MGRN1O60291 552 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 TRBC1P01850 177 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 GYPCP04921 128 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 PRSS1P07477 247 aa1.72□□□□□ -2.13
SMCHD1-211ENST00000584897 CCNB1P14635 433 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms