RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 AP3D1O14617 1153 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 SMAD9O15198 467 aaKnown RBP19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 ANP32DO95626 131 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 YES1P07947 543 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 ZCCHC18P0CG32 403 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 APOBEC1P41238 236 aaKnown RBP19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 DIO1P49895 249 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 IDH3AP50213 366 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 SYT14P1Q58G82 188 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 C6orf10Q5SRN2 563 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 TFAP2EQ6VUC0 442 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 MSANTD1Q6ZTZ1 278 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 LSRQ86X29 649 aaPredicted RBP19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 SLC43A2Q8N370 569 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 HS3ST6Q96QI5 342 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 ALPK1Q96QP1 1244 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 TPT1P8Q9HAU6 139 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 TCF7L2Q9NQB0 619 aa19.09■□□□□ 0.65
PPP4R1-228ENST00000584074 ABCA4P78363 2273 aa19.08■□□□□ 0.65
PPP4R1-228ENST00000584074 FAM234BA2RU67 622 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 RPS4Y1P22090 263 aaKnown RBP19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 CRATP43155 626 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 IDH2P48735 452 aaKnown RBP19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 DEFB113Q30KQ7 82 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 TMPPEQ6ZT21 453 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 GRINAQ7Z429 371 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 CMIPQ8IY22 773 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 SLC25A43Q8WUT9 341 aaPredicted RBP19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 WDR60Q8WVS4 1066 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 ZNF775Q96BV0 537 aaPredicted RBP19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 PSD2Q9BQI7 771 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 EBF4Q9BQW3 602 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 ACTR6Q9GZN1 396 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 FANCFQ9NPI8 374 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 KLHL9Q9P2J3 617 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 CHRNA9Q9UGM1 479 aa19.08■□□□□ 0.64
PPP4R1-228ENST00000584074 SULT2B1O00204 365 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 POLR3GO15318 223 aaPredicted RBP19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 CYTIPO60759 359 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 TGDSO95455 350 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 FESP07332 822 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 TFPIP10646 304 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 PPP3CBP16298 524 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 IL7RP16871 459 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 CD53P19397 219 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 LOXP28300 417 aaPredicted RBP19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 MAGEA8P43361 318 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 RASGEF1BQ0VAM2 473 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 MRPL2Q5T653 305 aaKnown RBP19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 SLC2A7Q6PXP3 512 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 CXorf67Q86X51 503 aaPredicted RBP19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 ADGRG3Q86Y34 549 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 GABRG1Q8N1C3 465 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 DYDC1Q8WWB3 177 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 GTF2H4Q92759 462 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 DNAJA3Q96EY1 480 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 OR11A1Q9GZK7 315 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 BCO1Q9HAY6 547 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 P2RX2Q9UBL9 471 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 GPR52Q9Y2T5 361 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 SPIN1Q9Y657 262 aaPredicted RBP19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 HEATR5AQ86XA9 2040 aa19.07■□□□□ 0.64
PPP4R1-228ENST00000584074 KLF4O43474 513 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 GCM2O75603 506 aaPredicted RBP19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 DBIP07108 87 aaKnown RBP19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 TFPTP0C1Z6 253 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 CCNA2P20248 432 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 PSMB1P20618 241 aaKnown RBP19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 DSTNP60981 165 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 GNA13Q14344 377 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 TSC22D1Q15714 1073 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 SLC38A5Q8WUX1 472 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 PMM1Q92871 262 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 ARL5BQ96KC2 179 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 TACO1Q9BSH4 297 aaKnown RBP19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 PAIP1Q9H074 479 aaKnown RBP19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 RLIMQ9NVW2 624 aa19.06■□□□□ 0.64
PPP4R1-228ENST00000584074 ZNF469Q96JG9 3925 aaPredicted RBP19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 PRRC2AP48634 2157 aaKnown RBP19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 BCHEP06276 602 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 AQP5P55064 265 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 STX1BP61266 288 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 CSNK2A1P68400 391 aaPredicted RBP19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 HDXQ7Z353 690 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 VRK2Q86Y07 508 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 TGIF2LYQ8IUE0 185 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 FUNDC1Q8IVP5 155 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 PEX5LQ8IYB4 626 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 OR52P1PQ8NH57 321 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 ZNF300Q96RE9 604 aaPredicted RBP19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 UBTD1Q9HAC8 227 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 PCDHB14Q9Y5E9 798 aa19.05■□□□□ 0.64
PPP4R1-228ENST00000584074 DSPPQ9NZW4 1301 aa19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 TMED7-TICAM2A0A0A6YYA0 188 aa19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 CFAP73A6NFT4 308 aa19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 ZNF814B7Z6K7 855 aa19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 EDNRAP25101 427 aa19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 MRPL19P49406 292 aaKnown RBP19.04■□□□□ 0.64
PPP4R1-228ENST00000584074 RPS26P11Q5JNZ5 115 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms