RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 MAP3K7CLP57077 242 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 KCNK10P57789 538 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ERVK-8P63133 956 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CSNK2BP67870 215 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PPP2R2BQ00005 443 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CHRNB3Q05901 458 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 LCP2Q13094 533 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 FADDQ13158 208 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 POU6F1Q14863 301 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 KIAA0040Q15053 153 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 P2RY6Q15077 328 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 NDUFA5Q16718 116 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DGUOKQ16854 277 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RFX4Q33E94 735 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM98BQ52LJ0 330 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 XKR7Q5GH72 579 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TOR1AIP1Q5JTV8 583 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PAGE3Q5JUK9 113 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 C6orf136Q5SQH8 315 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SYT6Q5T7P8 510 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF691Q5VV52 312 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SLX4IPQ5VYV7 408 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 WSCD1Q658N2 575 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CLEC6AQ6EIG7 209 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DHRS7BQ6IAN0 325 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 LAIR2Q6ISS4 152 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DOK6Q6PKX4 331 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HIST3H2AQ7L7L0 130 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC16A9Q7RTY1 509 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PRSS48Q7RTY5 328 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RABEPKQ7Z6M1 372 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZFAND4Q86XD8 727 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 C8orf59Q8N0T1 100 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RTL3Q8N8U3 475 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF383Q8NA42 475 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 NHLRC2Q8NBF2 726 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CHDHQ8NE62 594 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 IPMKQ8NFU5 416 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR8J3Q8NGG0 315 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR6Q1Q8NGQ2 317 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR13J1Q8NGT2 312 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR8K5Q8NH50 307 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 OR5K1Q8NHB7 308 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 STAG3L4Q8TBR4 150 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 BRSK1Q8TDC3 778 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PHF10Q8WUB8 498 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TWIST2Q8WVJ9 160 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNRF4Q8WWF5 429 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TMBIM1Q969X1 311 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 TUBGCP3Q96CW5 907 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 YIPF6Q96EC8 236 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PDLIM5Q96HC4 596 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SENP8Q96LD8 212 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 NSMCE2Q96MF7 247 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CCDC115Q96NT0 180 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 CTRCQ99895 268 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 KCTD14Q9BQ13 255 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ACBD6Q9BR61 282 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 SLC39A3Q9BRY0 314 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 MTG1Q9BT17 334 aaPredicted RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 FUNDC2Q9BWH2 189 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DERL2Q9GZP9 239 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 LAT2Q9GZY6 243 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ALG9Q9H6U8 611 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RMND5AQ9H871 391 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 HEBP1Q9NRV9 189 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ABCC13Q9NSE7 274 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 COMMD8Q9NX08 183 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 DDIT4Q9NX09 232 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 RCC2Q9P258 522 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 IL19Q9UHD0 177 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 IL17BQ9UHF5 180 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ERVW-1Q9UQF0 538 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PDE10AQ9Y233 779 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 IFT52Q9Y366 437 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 AP1M2Q9Y6Q5 423 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 ZNF236Q9UL36 1845 aa3.48□□□□□ -1.85
SMCHD1-208ENST00000583344 PDCD11Q14690 1871 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MN1Q10571 1320 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TRIP11Q15643 1979 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 IGLV3-10A0A075B6K4 115 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SYNJ2BP-COX16A0A087WUM0 186 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 FAM92AA1XBS5 289 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 MYBPHLA2RUH7 354 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 OOEPA6NGQ2 149 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CLDN24A6NM45 220 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CENPBD1B2RD01 187 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 TMEM189-UBE2V1I3L0A0 370 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 J3QRK9 145 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 PTGESO14684 152 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SRSF10O75494 262 aaKnown RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 AP2A2O94973 939 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SNX4O95219 450 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CLIC3O95833 236 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 SNAI1O95863 264 aaPredicted RBP3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 CHRNA1P02708 482 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 HLA-DQB2P05538 268 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 PGK2P07205 417 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 RETP07949 1114 aa3.47□□□□□ -1.85
SMCHD1-208ENST00000583344 LINC00032P0C843 101 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms