RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 TMEM176BQ3YBM2 270 aaPredicted RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 RPS26P11Q5JNZ5 115 aaPredicted RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 HBMQ6B0K9 141 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 C3orf33Q6P1S2 294 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 TMPPEQ6ZT21 453 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 FAM214BQ7L5A3 538 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 SERPINA11Q86U17 422 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CALHM3Q86XJ0 350 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 HIPK4Q8NE63 616 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 OR8J3Q8NGG0 315 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 RP9Q8TA86 221 aaKnown RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 RNASE6Q93091 150 aaKnown RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 CPNE4Q96A23 557 aaPredicted RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 INTS12Q96CB8 462 aaKnown RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 GMPPAQ96IJ6 420 aaPredicted RBP11.31□□□□□ -0.6
SNORD55-201ENST00000581525 TRIM8Q9BZR9 551 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 ARMC7Q9H6L4 198 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 EVA1AQ9H8M9 152 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 PLSCR4Q9NRQ2 329 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 SERINC1Q9NRX5 453 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 RLIMQ9NVW2 624 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 TRAPPC4Q9Y296 219 aa11.31□□□□□ -0.6
SNORD55-201ENST00000581525 MED12LQ86YW9 2145 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 INTS1Q8N201 2190 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 FAM221AA4D161 298 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 GMNCA6NCL1 334 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 AP3D1O14617 1153 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 DNPH1O43598 174 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 FZD7O75084 574 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 MFN2O95140 757 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SLC6A2P23975 617 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 EIF1AXP47813 144 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 IDH2P48735 452 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 AGFG1P52594 562 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SEC24CP53992 1094 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SORDQ00796 357 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 NFYCQ13952 458 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SCARB2Q14108 478 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SELPLGQ14242 412 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SGCBQ16585 318 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF239Q16600 458 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF311Q5JNZ3 666 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 GTF2IRD2BQ6EKJ0 949 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 CCDC80Q76M96 950 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF550Q7Z398 422 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SPATA21Q7Z572 469 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 PIGWQ7Z7B1 504 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 HMGN2P46Q86SG4 172 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 GTF2IRD2Q86UP8 949 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SLC43A2Q8N370 569 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 TMCO5AQ8N6Q1 288 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 LSMEM1Q8N8F7 131 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 BHLHE22Q8NFJ8 381 aaPredicted RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 NFKBIDQ8NI38 313 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 RNF128Q8TEB7 428 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 MARVELD3Q96A59 401 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SH3GL1Q99961 368 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 SRXN1Q9BYN0 137 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 TIGARQ9NQ88 270 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 CTPS2Q9NRF8 586 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 CHRNA9Q9UGM1 479 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 OSGIN1Q9UJX0 560 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 MCTS1Q9ULC4 181 aaKnown RBP11.3□□□□□ -0.6
SNORD55-201ENST00000581525 HDGFL3Q9Y3E1 203 aa11.3□□□□□ -0.6
SNORD55-201ENST00000581525 LOC100653049A0A140TA62 436 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 CYP7B1O75881 506 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 KRT34O76011 436 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PMS2P2O95744 297 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 OPN1LWP04000 364 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 C8BP07358 591 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PRF1P14222 555 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 COX6B1P14854 86 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 RYKP34925 604 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SFTPDP35247 375 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 CCR4P51679 360 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 POLR2HP52434 150 aaKnown RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 H3F3AP84243 136 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 MERTKQ12866 999 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PDK3Q15120 406 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SYT14P1Q58G82 188 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 REP15Q6BDI9 236 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 C8orf82Q6P1X6 216 aaPredicted RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 MEX3BQ6ZN04 569 aaKnown RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 P4HA3Q7Z4N8 544 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 BTLAQ7Z6A9 289 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 KRT73Q86Y46 540 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SLC30A8Q8IWU4 369 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ZZZ3Q8IYH5 903 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 GCNT2Q8N0V5 402 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 PCYOX1LQ8NBM8 494 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 C11orf65Q8NCR3 313 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF563Q8TA94 476 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SMPDL3BQ92485 455 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF583Q96ND8 569 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ZNF607Q96SK3 696 aa11.29□□□□□ -0.6
SNORD55-201ENST00000581525 ELAC2Q9BQ52 826 aaKnown RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 GPATCH1Q9BRR8 931 aaKnown RBP11.29□□□□□ -0.6
SNORD55-201ENST00000581525 SPATA5L1Q9BVQ7 753 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms