RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 SLC35A3Q9Y2D2 325 aa11.21□□□□□ -0.61
CBX1-206ENST00000581003 EMC9Q9Y3B6 208 aa11.21□□□□□ -0.61
CBX1-206ENST00000581003 ZC3H12DA2A288 527 aaKnown RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 DEFB108AA8MXU0 73 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 EDF1O60869 148 aaKnown RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 TGDSO95455 350 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 THBDP07204 575 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 PGCP20142 388 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 IST1P53990 364 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 CTBP2P56545 445 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 EEF1A1P68104 462 aaKnown RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 HOXC5Q00444 222 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 LRRC74AQ0VAA2 488 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 RGNQ15493 299 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 SYT14P1Q58G82 188 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 CGB2Q6NT52 195 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 STAC2Q6ZMT1 411 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 MSANTD1Q6ZTZ1 278 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 FCRLAQ7L513 359 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 ADGRG3Q86Y34 549 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 CLIP4Q8N3C7 705 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 ZNF563Q8TA94 476 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 CPNE4Q96A23 557 aaPredicted RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 SPDL1Q96EA4 605 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 DACH2Q96NX9 599 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 HHATLQ9HCP6 504 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 EXOSC3Q9NQT5 275 aaKnown RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 CCM2LQ9NUG4 571 aaPredicted RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 VAPAQ9P0L0 249 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 KLHL13Q9P2N7 655 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 STOML1Q9UBI4 398 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 P2RX2Q9UBL9 471 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 LIPT1Q9Y234 373 aa11.2□□□□□ -0.62
CBX1-206ENST00000581003 ZNF443Q9Y2A4 671 aaPredicted RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 ANKHD1Q8IWZ3 2542 aaKnown RBP11.2□□□□□ -0.62
CBX1-206ENST00000581003 A0A096LPI6 279 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 TRBV5-3A0A0A0MS03 114 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 TMEM72A0PK05 275 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 CLIC1O00299 241 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 TFPIP10646 304 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 IL7RP16871 459 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 NCF2P19878 526 aaPredicted RBP11.19□□□□□ -0.62
CBX1-206ENST00000581003 TACR3P29371 465 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 DIO1P49895 249 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 SELPLGQ14242 412 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 SQLEQ14534 574 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 PDSS1Q5T2R2 415 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 LRIF1Q5T3J3 769 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 FBXW10Q5XX13 1052 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 TFAP2EQ6VUC0 442 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 ATG4DQ86TL0 474 aaPredicted RBP11.19□□□□□ -0.62
CBX1-206ENST00000581003 RETREG3Q86VR2 466 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 OR52P1PQ8NH57 321 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 NFKBIDQ8NI38 313 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 PSD2Q9BQI7 771 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 PLEKHF2Q9H8W4 249 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 MTHFD2LQ9H903 347 aaPredicted RBP11.19□□□□□ -0.62
CBX1-206ENST00000581003 SLC24A3Q9HC58 644 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 PLSCR4Q9NRQ2 329 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 CHRNA9Q9UGM1 479 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 PRSS50Q9UI38 385 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 ST6GALNAC2Q9UJ37 374 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 HEATR5AQ86XA9 2040 aa11.19□□□□□ -0.62
CBX1-206ENST00000581003 ANKRD17O75179 2603 aaKnown RBP11.19□□□□□ -0.62
CBX1-206ENST00000581003 UQCRHLA0A096LP55 91 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 TMED7-TICAM2A0A0A6YYA0 188 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 A0A0G2JND7 137 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 GJE1A6NN92 205 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 DBIP07108 87 aaKnown RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 IMPDH2P12268 514 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 LOXP28300 417 aaPredicted RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 NTF4P34130 210 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 PEX19P40855 299 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 ACAA2P42765 397 aaKnown RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 ART1P52961 327 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 EPS8Q12929 822 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 BNIP2Q12982 314 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 EEF1A1P5Q5VTE0 462 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 ALKBH2Q6NS38 261 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 GRINAQ7Z429 371 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 SERPINA11Q86U17 422 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 CXorf67Q86X51 503 aaPredicted RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 CCDC103Q8IW40 242 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 TMEM234Q8WY98 164 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 PIK3IP1Q96FE7 263 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 CPPED1Q9BRF8 314 aaPredicted RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 MED18Q9BUE0 208 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 A4GALTQ9NPC4 353 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 PAQR5Q9NXK6 330 aaPredicted RBP11.18□□□□□ -0.62
CBX1-206ENST00000581003 OSGIN1Q9UJX0 560 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 TMED7Q9Y3B3 224 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 CREBBPQ92793 2442 aa11.18□□□□□ -0.62
CBX1-206ENST00000581003 CFAP73A6NFT4 308 aa11.17□□□□□ -0.62
CBX1-206ENST00000581003 SULT2B1O00204 365 aa11.17□□□□□ -0.62
CBX1-206ENST00000581003 CYTIPO60759 359 aa11.17□□□□□ -0.62
CBX1-206ENST00000581003 GCM2O75603 506 aaPredicted RBP11.17□□□□□ -0.62
CBX1-206ENST00000581003 PRKD3O94806 890 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms