RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 HERVK_113P63132 956 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ERVK-25P63136 954 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 DLK1P80370 383 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 TFAMQ00059 246 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 EIF4EBP2Q13542 120 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 RAB31Q13636 194 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 GK2Q14410 553 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 PTGES3Q15185 160 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 RFX4Q33E94 735 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 AGKQ53H12 422 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SOWAHCQ53LP3 525 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 SPIN3Q5JUX0 258 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 IDNKQ5T6J7 187 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 OGFRL1Q5TC84 451 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 C9orf135Q5VTT2 229 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FAM69BQ5VUD6 431 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 MEDAGQ5VYS4 303 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FAM90A2PQ658T7 463 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FRMPD2BQ6IN97 320 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FAM71F2Q6NXP2 309 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 KIAA1324Q6UXG2 1013 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 LINGO4Q6UY18 593 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 HACD2Q6Y1H2 254 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 KYAT3Q6YP21 454 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 CCNI2Q6ZMN8 369 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 C3P1Q6ZMU1 363 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SSX7Q7RTT5 188 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SSX6Q7RTT6 188 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 H2BFWTQ7Z2G1 175 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 MEX3DQ86XN8 651 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 CACUL1Q86Y37 369 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 CBWD2Q8IUF1 395 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 LACC1Q8IV20 430 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 IFT20Q8IY31 132 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF595Q8IYB9 648 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 APCDD1Q8J025 514 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PGAM4Q8N0Y7 254 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 TMEM123Q8N131 208 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 EID3Q8N140 333 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FBXL14Q8N1E6 418 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ARHGAP24Q8N264 748 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 MREGQ8N565 214 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZCCHC9Q8N567 271 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 ARL14EPQ8N8R7 260 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 SIDT2Q8NBJ9 832 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 CHDHQ8NE62 594 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 NUBPLQ8TB37 319 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PIGXQ8TBF5 258 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 MAGEE2Q8TD90 523 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 APH1BQ8WW43 257 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PIGCQ92535 297 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 NAT6Q93015 286 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 OTULINQ96BN8 352 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PPWD1Q96BP3 646 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 TAMM41Q96BW9 452 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 C12orf43Q96C57 262 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 ORAI1Q96D31 301 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 CPB2Q96IY4 423 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 NOL4LQ96MY1 436 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF385AQ96PM9 386 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 XPO6Q96QU8 1125 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 PFDN5Q99471 154 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 LGMNQ99538 433 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 C12orf57Q99622 126 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 CPNE1Q99829 537 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 CCDC3Q9BQI4 270 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SLC35A5Q9BS91 424 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PCGF1Q9BSM1 259 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF426Q9BUY5 554 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ERVK-6Q9BXR3 956 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 RBM38Q9H0Z9 239 aaKnown RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 ING2Q9H160 280 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PORCNQ9H237 461 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PIGMQ9H3S5 423 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 C1orf198Q9H425 327 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 PLEKHA4Q9H4M7 779 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SLA2Q9H6Q3 261 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 AAMDCQ9H7C9 122 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF430Q9H8G1 570 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 CALHM2Q9HA72 323 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 IL1RL2Q9HB29 575 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 RAB9BQ9NP90 201 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FZD3Q9NPG1 666 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 GPR173Q9NS66 373 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ACOXLQ9NUZ1 547 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 FAIMQ9NVQ4 179 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 SDHAF2Q9NX18 166 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ANKRD10Q9NXR5 420 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 TMEM9Q9P0T7 183 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF225Q9UK10 706 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ZNF490Q9ULM2 529 aaPredicted RBP3.63□□□□□ -1.83
SMG8-205ENST00000580798 DHDHQ9UQ10 334 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 HEY1Q9Y5J3 304 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 CPQQ9Y646 472 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 EMSYQ7Z589 1322 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 NRCAMQ92823 1304 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 ABCC11Q96J66 1382 aa3.63□□□□□ -1.83
SMG8-205ENST00000580798 TEX13DA0A0J9YY54 714 aaPredicted RBP3.62□□□□□ -1.83
SMG8-205ENST00000580798 KBTBD11-OT1A0A1B0GTJ5 212 aa3.62□□□□□ -1.83
SMG8-205ENST00000580798 C5orf60A6NFR6 353 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms