RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 NHSL2Q5HYW2 709 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 OR2T5Q6IEZ7 315 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ARSKQ6UWY0 536 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ZNF550Q7Z398 422 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 CARM1Q86X55 608 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 LILRA2Q8N149 483 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 SVOPLQ8N434 492 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 OR2T29Q8NH02 315 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 LRTOMTQ8WZ04 291 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 CNOT9Q92600 299 aaKnown RBP14.05□□□□□ -0.16
SS18-216ENST00000580751 PIP5K1AQ99755 562 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 PKP2Q99959 881 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 PIGQQ9BRB3 760 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 ANKRD19PQ9H560 264 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 NKX1-2Q9UD57 310 aaPredicted RBP14.05□□□□□ -0.16
SS18-216ENST00000580751 ACAD8Q9UKU7 415 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 VDAC3Q9Y277 283 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 RPH3AQ9Y2J0 694 aaPredicted RBP14.05□□□□□ -0.16
SS18-216ENST00000580751 ZGRF1Q86YA3 2104 aa14.05□□□□□ -0.16
SS18-216ENST00000580751 FLNCQ14315 2725 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 BCKDKO14874 412 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 SLC19A2O60779 497 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 BCAS1O75363 584 aaPredicted RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 THRBP10828 461 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 PLA2G2AP14555 144 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 CHMP24386 653 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 ARHGDIAP52565 204 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 HMGA2P52926 109 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 PLAURQ03405 335 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 RANBP3LQ86VV4 465 aaPredicted RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 CHERPQ8IWX8 916 aaKnown RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 GTPBP8Q8N3Z3 284 aaPredicted RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 GPR119Q8TDV5 335 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 TMEM234Q8WY98 164 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 ST8SIA1Q92185 356 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 RSPO3Q9BXY4 272 aaPredicted RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 AMBRA1Q9C0C7 1298 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 RLIMQ9NVW2 624 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 SPRR3Q9UBC9 169 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 TESQ9UGI8 421 aaKnown RBP14.04□□□□□ -0.16
SS18-216ENST00000580751 SLC6A5Q9Y345 797 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 CHST2Q9Y4C5 530 aa14.04□□□□□ -0.16
SS18-216ENST00000580751 FREM3P0C091 2139 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 OR2M5A3KFT3 312 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 FAAHO00519 579 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 GNGT2O14610 69 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 AP3D1O14617 1153 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 PRRG2O14669 202 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 EPPINO95925 133 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 LINGO3P0C6S8 592 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 TCEA1P23193 301 aaKnown RBP14.03□□□□□ -0.16
SS18-216ENST00000580751 ADH6P28332 368 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 RYKP34925 604 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 CASP6P55212 293 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 GFRA1P56159 465 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 RGS8P57771 180 aaPredicted RBP14.03□□□□□ -0.16
SS18-216ENST00000580751 B3GALT5-AS1P59052 145 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 MRPL49Q13405 166 aaKnown RBP14.03□□□□□ -0.16
SS18-216ENST00000580751 QPRTQ15274 297 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 TMEM44Q2T9K0 475 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 VASNQ6EMK4 673 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 FGD2Q7Z6J4 655 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 CLIP4Q8N3C7 705 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 PACRGLQ8N7B6 248 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 ZNF563Q8TA94 476 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 FAM57AQ8TBR7 257 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 PHF10Q8WUB8 498 aaKnown RBP14.03□□□□□ -0.16
SS18-216ENST00000580751 ABTB1Q969K4 478 aaPredicted RBP14.03□□□□□ -0.16
SS18-216ENST00000580751 MRGPRX4Q96LA9 322 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 DHRS1Q96LJ7 313 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 PRRC1Q96M27 445 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 EPYCQ99645 322 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 VCXQ9H320 206 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 REEP1Q9H902 201 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 ZNF835Q9Y2P0 537 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 ESPL1Q14674 2120 aa14.03□□□□□ -0.16
SS18-216ENST00000580751 NPIPA2E9PIF3 369 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 NPIPA3F8WFD2 350 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 H0YJX3 145 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 ETV2O00321 342 aaPredicted RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 OR5F1O95221 314 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 TPOP07202 933 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 PRKCAP17252 672 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 BMP7P18075 431 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 GNLYP22749 145 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 ELK4P28324 431 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 DNAJA1P31689 397 aaKnown RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 OR1E2P47887 323 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 COPZ1P61923 177 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 CRYZQ08257 329 aaKnown RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 EPS8Q12929 822 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 FOXF1Q12946 379 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 TRIP10Q15642 601 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 SLC25A53Q5H9E4 307 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 WLSQ5T9L3 541 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 OGFRL1Q5TC84 451 aaPredicted RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 HMBOX1Q6NT76 420 aa14.02□□□□□ -0.17
SS18-216ENST00000580751 Q6ZPB1 254 aaPredicted RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 TSEN54Q7Z6J9 526 aaKnown RBP14.02□□□□□ -0.17
SS18-216ENST00000580751 HIPK1Q86Z02 1210 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms