RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 C16orf89Q6UX73 402 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 ANKFN1Q8N957 763 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 OR10A6Q8NH74 314 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 NODALQ96S42 347 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 SDF2Q99470 211 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 KAT8Q9H7Z6 458 aaKnown RBP17.35■□□□□ 0.37
LIMD2-209ENST00000580222 METTL7AQ9H8H3 244 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 FBXO34Q9NWN3 711 aa17.35■□□□□ 0.37
LIMD2-209ENST00000580222 B2RBV5 119 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 C5orf58C9J3I9 102 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 TLX2O43763 284 aaPredicted RBP17.34■□□□□ 0.37
LIMD2-209ENST00000580222 STX11O75558 287 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 UTS2O95399 124 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 H6PDO95479 791 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 PTGDSP41222 190 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 KIR2DL2P43627 348 aaPredicted RBP17.34■□□□□ 0.37
LIMD2-209ENST00000580222 LHX2P50458 406 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 SLC7A2P52569 658 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 CRISP3P54108 245 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 GFRA1P56159 465 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 SLC25A3Q00325 362 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 GNA13Q14344 377 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 CHRFAM7AQ494W8 412 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 C8orf82Q6P1X6 216 aaPredicted RBP17.34■□□□□ 0.37
LIMD2-209ENST00000580222 OLIG3Q7RTU3 272 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 ZAR1Q86SH2 424 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 PGAM4Q8N0Y7 254 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 TMEM19Q96HH6 336 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 ZNF350Q9GZX5 532 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 PIF1Q9H611 641 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 GALNT9Q9HCQ5 603 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 A4GALTQ9NPC4 353 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 KLRF1Q9NZS2 232 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 CALML5Q9NZT1 146 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 AP3M1Q9Y2T2 418 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 WDR45Q9Y484 360 aa17.34■□□□□ 0.37
LIMD2-209ENST00000580222 NPIPA5A0A0B4J1W7 369 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-209ENST00000580222 PRAMEF27A3QJZ7 478 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 PRAMEF25A6NGN4 478 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 NPIPA7E9PJI5 369 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 HAX1O00165 279 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 CGAP01215 116 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 TP53P04637 393 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-209ENST00000580222 CHRM4P08173 479 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 NPIPA8P0DM63 369 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 T-ENOLP0DO92 83 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 ARAFP10398 606 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 LCN1P31025 176 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 GPR68Q15743 365 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 GRAMD1BQ3KR37 738 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF704Q6ZNC4 412 aaPredicted RBP17.33■□□□□ 0.36
LIMD2-209ENST00000580222 LRRC74BQ6ZQY2 392 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 SERPINA11Q86U17 422 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 SLC15A3Q8IY34 581 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 CNEP1R1Q8N9A8 125 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 OR1J4Q8NGS1 313 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 FBXO27Q8NI29 283 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 NFKBIDQ8NI38 313 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 MAL2Q969L2 176 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 TRNT1Q96Q11 434 aaKnown RBP17.33■□□□□ 0.36
LIMD2-209ENST00000580222 SPATA9Q9BWV2 254 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 OSBPL11Q9BXB4 747 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 CXorf56Q9H5V9 222 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 TMEM38AQ9H6F2 299 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 SPAG4Q9NPE6 437 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 POLE3Q9NRF9 147 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 CMTM6Q9NX76 183 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 FLRT3Q9NZU0 649 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 MKLN1Q9UL63 735 aa17.33■□□□□ 0.36
LIMD2-209ENST00000580222 C16orf97H3BN30 126 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 NME4O00746 187 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 KIAA0513O60268 411 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 TFPTP0C1Z6 253 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 POU2F1P14859 743 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 HPGDP15428 266 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 EVI2BP34910 448 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 CLK3P49761 638 aaKnown RBP17.32■□□□□ 0.36
LIMD2-209ENST00000580222 CLDN18P56856 261 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 CDK6Q00534 326 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 SCARB2Q14108 478 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 RPS26P11Q5JNZ5 115 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-209ENST00000580222 C6orf89Q6UWU4 347 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 FRRS1Q6ZNA5 592 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 RINLQ6ZS11 566 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 NET1Q7Z628 596 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-209ENST00000580222 GRAMD2AQ8IUY3 354 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF619Q8N2I2 560 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF614Q8N883 585 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 WDSUB1Q8N9V3 476 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ZNF610Q8N9Z0 462 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 C11orf65Q8NCR3 313 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 RBM15BQ8NDT2 890 aaKnown RBP17.32■□□□□ 0.36
LIMD2-209ENST00000580222 SLC38A5Q8WUX1 472 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 C19orf24Q9BVV8 132 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 OR2B2Q9GZK3 357 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ADA2Q9NZK5 511 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ABCG2Q9UNQ0 655 aa17.32■□□□□ 0.36
LIMD2-209ENST00000580222 ANGPT4Q9Y264 503 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms