RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ASTLQ6HA08 431 aaPredicted RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 USP51Q70EK9 711 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ZNF765Q7L2R6 523 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 BBS1Q8NFJ9 593 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 VN1R2Q8NFZ6 395 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 HIST1H2AAQ96QV6 131 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 ELF4Q99607 663 aaPredicted RBP11.22□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM38AQ9H6F2 299 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 SFXN1Q9H9B4 322 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 POLE3Q9NRF9 147 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PLCL2Q9UPR0 1127 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 PCDHGB2Q9Y5G2 931 aa11.22□□□□□ -0.61
ERBB2-206ENST00000578373 A0A0B4J203 849 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 HYKKA2RU49 373 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 C17orf105B2RV13 164 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 HMGN4O00479 90 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SEMA4FO95754 770 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 TM4SF4P48230 202 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 EFR3AQ14156 821 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 C12orf40Q86WS4 652 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 OR4M1Q8NGD0 313 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SERINC2Q96SA4 455 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 CHST8Q9H2A9 424 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM14AQ9Y6G1 99 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 CACNA1EQ15878 2313 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SFTPDP35247 375 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SPOCK1Q08629 439 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 TMEM151BQ8IW70 566 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 OR13C3Q8NGS6 347 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 LGALS14Q8TCE9 139 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 GIMAP1Q8WWP7 306 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SLC7A6Q92536 515 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 PDXPQ96GD0 296 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 GMEB2Q9UKD1 530 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SLC35A3Q9Y2D2 325 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 SCN3AQ9NY46 2000 aa11.21□□□□□ -0.61
ERBB2-206ENST00000578373 A0A1W2PR48 441 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 H7C2Y5 167 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 PEX12O00623 359 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 UGT2B10P36537 528 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 POU4F2Q12837 409 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 SELENBP1Q13228 472 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 GDF7Q7Z4P5 450 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 LRRC28Q86X40 367 aaPredicted RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 GALNT6Q8NCL4 622 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 PFN4Q8NHR9 129 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 ELP4Q96EB1 424 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 PITX2Q99697 317 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 DIMT1Q9UNQ2 313 aaKnown RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 PRSS38A1L453 326 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 SLC16A7O60669 478 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 MTRF1O75570 445 aaKnown RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 PRSS23O95084 383 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 GPR75O95800 540 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 SLC2A5P22732 501 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 CTGFP29279 349 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 RAB11BQ15907 218 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 FAM76BQ5HYJ3 339 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 ZC3H10Q96K80 434 aaKnown RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 FAM71F1Q96KD3 344 aaPredicted RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 OR1F2PQ96R84 312 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 CDCP1Q9H5V8 836 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 NOX3Q9HBY0 568 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 AKIP1Q9NQ31 210 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 HINT3Q9NQE9 182 aaKnown RBP11.21□□□□□ -0.62
ERBB2-206ENST00000578373 ASIC5Q9NY37 505 aa11.21□□□□□ -0.62
ERBB2-206ENST00000578373 OR2W5A6NFC9 320 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 KDM4EB2RXH2 506 aaPredicted RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 SSX4O60224 188 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 RAB3DO95716 219 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 IFNA21P01568 189 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 HNRNPA2B1P22626 353 aaKnown RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 POU3F4P49335 361 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 KIAA0040Q15053 153 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 DEFB133Q30KQ1 61 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 C3orf38Q5JPI3 329 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 SFXN4Q6P4A7 337 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ABHD17CQ6PCB6 329 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 HAGHLQ6PII5 290 aaPredicted RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 FAM198BQ6UWH4 519 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 DPY19L4Q7Z388 723 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ADIPOR2Q86V24 386 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 OR13C5Q8NGS8 318 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ABHD4Q8TB40 342 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 CNOT9Q92600 299 aaKnown RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 SAV1Q9H4B6 383 aaPredicted RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 V9GY05 133 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 RREB1Q92766 1687 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ANKRD33BA6NCL7 494 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ZNF208O43345 1280 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 FARS2O95363 451 aaKnown RBP11.2□□□□□ -0.62
ERBB2-206ENST00000578373 SIX6O95475 246 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.626e-9■■■■□ 21.2
ERBB2-206ENST00000578373 FAM69BQ5VUD6 431 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 ZFPM2Q8WW38 1151 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 TXNDC15Q96J42 360 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 MFFQ9GZY8 342 aa11.2□□□□□ -0.62
ERBB2-206ENST00000578373 C17orf113A0A1B0GUU1 675 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms