RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 STOML1Q9UBI4 398 aa11.47□□□□□ -0.57
CCDC57-211ENST00000578187 PACSIN3Q9UKS6 424 aa11.47□□□□□ -0.57
CCDC57-211ENST00000578187 PLEKHA6Q9Y2H5 1048 aa11.47□□□□□ -0.57
CCDC57-211ENST00000578187 CDHR4A6H8M9 788 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 H0YC42 278 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 FXYD1O00168 92 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ADAM11O75078 769 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 CYP7B1O75881 506 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 IL7RP16871 459 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 PGCP20142 388 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 IL11P20809 199 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 CPOXP36551 454 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 SLC6A8P48029 635 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 TPD52P55327 224 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 MTPNP58546 118 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 GNGT1P63211 74 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 SELENBP1Q13228 472 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 SELPLGQ14242 412 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 LIN52Q52LA3 116 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 MRPL2Q5T653 305 aaKnown RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 RNF220Q5VTB9 566 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 REP15Q6BDI9 236 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 PAMR1Q6UXH9 720 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ZNF836Q6ZNA1 936 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ESPNLQ6ZVH7 1005 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 NET1Q7Z628 596 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 VRK2Q86Y07 508 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 TGIF2LYQ8IUE0 185 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 FBXO27Q8NI29 283 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 LINC01560Q8TB33 94 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 CNOT9Q92600 299 aaKnown RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 DACH2Q96NX9 599 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ELAC2Q9BQ52 826 aaKnown RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 GALNT8Q9NY28 637 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ZNF443Q9Y2A4 671 aaPredicted RBP11.46□□□□□ -0.57
CCDC57-211ENST00000578187 ZNF175Q9Y473 711 aa11.46□□□□□ -0.57
CCDC57-211ENST00000578187 POLQO75417 2590 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 SH3D21A4FU49 640 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 SLC22A20A6NK97 555 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 C5orf58C9J3I9 102 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 FAAHO00519 579 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 AP3D1O14617 1153 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 MRASO14807 208 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ADAMDEC1O15204 470 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 EFNA2O43921 213 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 SNX3O60493 162 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CCDC22O60826 627 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 PGM3O95394 542 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 TGM6O95932 706 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 NPPAP01160 153 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CRHP06850 196 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 PABPC4LP0CB38 370 aaKnown RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ETS2P15036 469 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ME2P23368 584 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 SESN3P58005 492 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 RPS3AP61247 264 aaKnown RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CDK6Q00534 326 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 FOXF2Q12947 444 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CAPRIN1Q14444 709 aaKnown RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 LARS2Q15031 903 aaKnown RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ADRM1Q16186 407 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ZSWIM7Q19AV6 140 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 REEP3Q6NUK4 255 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 PLXDC2Q6UX71 529 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 PTOV1Q86YD1 416 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 GCNT2Q8N0V5 402 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 LILRA2Q8N149 483 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 NFKBIDQ8NI38 313 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 TMEM234Q8WY98 164 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 MBD6Q96DN6 1003 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ZNF845Q96IR2 970 aaPredicted RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 KLHL15Q96M94 604 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CCDC106Q9BWC9 280 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 PINK1Q9BXM7 581 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 LIME1Q9H400 295 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 TMEM185BQ9H7F4 350 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 KAT8Q9H7Z6 458 aaKnown RBP11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ACER3Q9NUN7 267 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 ARMCX1Q9P291 453 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 CHST2Q9Y4C5 530 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 F8P00451 2351 aa11.45□□□□□ -0.58
CCDC57-211ENST00000578187 A0A0J9YW62 118 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 GJE1A6NN92 205 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 C3orf80F5H4A9 247 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 EIF1AYO14602 144 aaKnown RBP11.44□□□□□ -0.58
CCDC57-211ENST00000578187 MSTNO14793 375 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 SMNDC1O75940 238 aaKnown RBP eCLIP11.44□□□□□ -0.58
CCDC57-211ENST00000578187 KLK2P20151 261 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 SHC1P29353 583 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 RBBP4Q09028 425 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 EPS8Q12929 822 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 SCARB2Q14108 478 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 MMEL1Q495T6 779 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 C3orf33Q6P1S2 294 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 PLEKHM3Q6ZWE6 761 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 SERPINA11Q86U17 422 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 CNEP1R1Q8N9A8 125 aa11.44□□□□□ -0.58
CCDC57-211ENST00000578187 OR8J3Q8NGG0 315 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms