RNA–Protein interactions for RNA: ENST00000577393.1

PPP4R1-204, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-204ENST00000577393 OR5B2Q96R09 309 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 MED4Q9NPJ6 270 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 RLIMQ9NVW2 624 aa23.59■■□□□ 1.37
PPP4R1-204ENST00000577393 CSMD1Q96PZ7 3565 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 PABPC4LP0CB38 370 aaKnown RBP23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 TROVE2P10155 538 aaKnown RBP eCLIP23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 EPXP11678 715 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 PPIBP23284 216 aaKnown RBP23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 RAC3P60763 192 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 GUCY1A3Q02108 690 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 DLEU7Q6UYE1 221 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF836Q6ZNA1 936 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 C10orf111Q8N326 155 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 OR6K3Q8NGY3 331 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 RNF128Q8TEB7 428 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 LEF1Q9UJU2 399 aaPredicted RBP23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 ZNF443Q9Y2A4 671 aaPredicted RBP23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 GMEB1Q9Y692 573 aa23.58■■□□□ 1.37
PPP4R1-204ENST00000577393 POLQO75417 2590 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CSMD2Q7Z408 3487 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CDHR4A6H8M9 788 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CTAG2O75638 210 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 VIMP08670 466 aaKnown RBP23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CD79BP40259 229 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 EPS8Q12929 822 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 SYT14P1Q58G82 188 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 FCRLAQ7L513 359 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 ABHD3Q8WU67 409 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 SLC25A43Q8WUT9 341 aaPredicted RBP23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 IKZF5Q9H5V7 419 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 BCL2L10Q9HD36 194 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 PLSCR4Q9NRQ2 329 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CHRNA9Q9UGM1 479 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 NDUFAF1Q9Y375 327 aa23.57■■□□□ 1.36
PPP4R1-204ENST00000577393 CFAP73A6NFT4 308 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 FAAHO00519 579 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 THBS1P07996 1170 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 ENPP1P22413 925 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 PCYT1AP49585 367 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 SF3A3Q12874 501 aaKnown RBP eCLIP23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 LARS2Q15031 903 aaKnown RBP23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 DAZAP2Q15038 168 aaPredicted RBP23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 GCNT6Q5T4J0 391 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 PRAMEF8Q5VWM4 474 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 PRAMEF7Q5VXH5 474 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 CGB2Q6NT52 195 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 ADGRG3Q86Y34 549 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 ZNF440Q8IYI8 595 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 CLIP4Q8N3C7 705 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 BBS10Q8TAM1 723 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 GPATCH1Q9BRR8 931 aaKnown RBP23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 SLC39A3Q9BRY0 314 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 ELOVL5Q9NYP7 299 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 ZNF232Q9UNY5 417 aa23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 SPIN1Q9Y657 262 aaPredicted RBP23.56■■□□□ 1.36
PPP4R1-204ENST00000577393 IGHV3-15A0A0B4J1V0 119 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 FAM221AA4D161 298 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 A6NNC1 897 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 C5orf58C9J3I9 102 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 PGM3O95394 542 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 GKN3PP0CG01 181 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 TFPIP10646 304 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 POU2F1P14859 743 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 AGTR1P30556 359 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 KCNJ5P48544 419 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 ARFIP2P53365 341 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 RNPS1Q15287 305 aaKnown RBP23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 RNF220Q5VTB9 566 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 TMPPEQ6ZT21 453 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 RETREG3Q86VR2 466 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 DPP10Q8N608 796 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 TSPEARQ8WU66 669 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 DACH2Q96NX9 599 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 CCDC134Q9H6E4 229 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 CACYBPQ9HB71 228 aaKnown RBP23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 IFT52Q9Y366 437 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 CHST2Q9Y4C5 530 aa23.55■■□□□ 1.36
PPP4R1-204ENST00000577393 SH3D21A4FU49 640 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 EVPLLA8MZ36 301 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 ANGPT2O15123 496 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 PRKD3O94806 890 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 ARAFP10398 606 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 UQCRBP14927 111 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 GPX2P18283 190 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 CCNA2P20248 432 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 SLC1A3P43003 542 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 HTR3AP46098 478 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 DIO1P49895 249 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 ZSWIM7Q19AV6 140 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 RUNDC3AQ59EK9 446 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 DHDDSQ86SQ9 333 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 TUSC5Q8IXB3 177 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 SLC43A2Q8N370 569 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 NFKBIDQ8NI38 313 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 CPPED1Q9BRF8 314 aaPredicted RBP23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 SPATA9Q9BWV2 254 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 RASSF1Q9NS23 344 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 OSGIN1Q9UJX0 560 aa23.54■■□□□ 1.36
PPP4R1-204ENST00000577393 CORO2BQ9UQ03 480 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms