RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 HOXD1Q9GZZ0 328 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 KAT8Q9H7Z6 458 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 NANOGQ9H9S0 305 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 P2RX2Q9UBL9 471 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 ACAD8Q9UKU7 415 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 LIPT1Q9Y234 373 aa8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 MRPS18CQ9Y3D5 142 aaKnown RBP8.53□□□□□ -1.04
NPLOC4-219ENST00000576713 CSMD1Q96PZ7 3565 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 PRRG2O14669 202 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF264O43296 627 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 FRS3O43559 492 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 TPST1O60507 370 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 PGM3O95394 542 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 NTN1O95631 604 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 CSTAP01040 98 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 GLI4P10075 376 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 HPGDP15428 266 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF708P17019 499 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 PRKCAP17252 672 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 AQP1P29972 269 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 CLK3P49761 638 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 P2RX1P51575 399 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 NUP107P57740 925 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 KCNJ10P78508 379 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 RBPJQ06330 500 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 FADDQ13158 208 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF630Q2M218 657 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ACSF3Q4G176 576 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 MRPL2Q5T653 305 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 RAET1LQ5VY80 246 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 NET1Q7Z628 596 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 MTERF4Q7Z6M4 381 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 CALHM3Q86XJ0 350 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 TMCO5AQ8N6Q1 288 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF527Q8NB42 609 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 SSC4DQ8WTU2 575 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 SFXN2Q96NB2 322 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 GPATCH1Q9BRR8 931 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 THUMPD3Q9BV44 507 aaKnown RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 SPATA9Q9BWV2 254 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 TMEM185BQ9H7F4 350 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 MTHFD2LQ9H903 347 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 POLE3Q9NRF9 147 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 SDHAF3Q9NRP4 125 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ARL8BQ9NVJ2 186 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 CMTM6Q9NX76 183 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ALKBH4Q9NXW9 302 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 CAMK2AQ9UQM7 478 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF443Q9Y2A4 671 aaPredicted RBP8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZNF281Q9Y2X9 895 aa8.52□□□□□ -1.05
NPLOC4-219ENST00000576713 ZGRF1Q86YA3 2104 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 A0A0G2JNJ9 132 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 A0A0G2JPF8 293 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 A0A1B0GUH1 482 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SCO2A0A1W2PP80 73 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 A1L4Q6 167 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 C7orf72A4D263 438 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CDHR4A6H8M9 788 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CCT8L1PA6NM43 557 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 HNRNPCL2B2RXH8 293 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 HNRNPCL3B7ZW38 293 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 E9PLN8 166 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 H3BML4 177 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ETV2O00321 342 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 AIM2O14862 343 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 BCKDKO14874 412 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SLC22A2O15244 555 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 HNRNPCL1O60812 293 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CCDC22O60826 627 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CYP7B1O75881 506 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SOX30O94993 753 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ACTL6AO96019 429 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GKN3PP0CG01 181 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 HNRNPCL4P0DMR1 293 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 PEPDP12955 493 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GP1BBP13224 206 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CPN1P15169 458 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 KLK2P20151 261 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 FUT4P22083 530 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SLC6A2P23975 617 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CHMP24386 653 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ACVR2AP27037 513 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 ADSLP30566 484 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 MAGEA8P43361 318 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CPA2P48052 419 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CRISP3P54108 245 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 HOXC5Q00444 222 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CDK6Q00534 326 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SRYQ05066 204 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 PMPCAQ10713 525 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CYLC2Q14093 348 aaPredicted RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 SCARB2Q14108 478 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GANABQ14697 944 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 QPRTQ15274 297 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 CTU2Q2VPK5 515 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 COQ5Q5HYK3 327 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 GCNT6Q5T4J0 391 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 C1orf185Q5T7R7 199 aa8.51□□□□□ -1.05
NPLOC4-219ENST00000576713 WLSQ5T9L3 541 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms