RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 CXCL13O43927 109 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 GMNNO75496 209 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 CIB2O75838 187 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 TFPTP0C1Z6 253 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 IL7RP16871 459 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 PGCP20142 388 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 SLC6A2P23975 617 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 ADH6P28332 368 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 SHC1P29353 583 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 MTPNP58546 118 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 SNTB1Q13884 538 aaKnown RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 GNA13Q14344 377 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 CTU2Q2VPK5 515 aaKnown RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 HBMQ6B0K9 141 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 ASRGL1Q7L266 308 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 PEX5LQ8IYB4 626 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 CNEP1R1Q8N9A8 125 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 FAM71CQ8NEG0 241 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 OR2V1Q8NHB1 315 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF563Q8TA94 476 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 MAL2Q969L2 176 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 LRRC46Q96FV0 321 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 MRGPRX4Q96LA9 322 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 KLHL15Q96M94 604 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 SPOCK3Q9BQ16 436 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 GPATCH1Q9BRR8 931 aaKnown RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 CADM1Q9BY67 442 aaKnown RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 PRRG4Q9BZD6 226 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 ENKD1Q9H0I2 346 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 MTHFD2LQ9H903 347 aaPredicted RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 THUMPD1Q9NXG2 353 aaKnown RBP11.91□□□□□ -0.5
RPAIN-216ENST00000575599 ZNF175Q9Y473 711 aa11.91□□□□□ -0.5
RPAIN-216ENST00000575599 MED12LQ86YW9 2145 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 INTS1Q8N201 2190 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 A0A0J9YW62 118 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 FXYD1O00168 92 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 EFNA2O43921 213 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 DNAJA2O60884 412 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 IL18BPO95998 194 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 DBIP07108 87 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 FCGR2AP12318 317 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 NQO1P15559 274 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 IGFBP2P18065 325 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 RPS4Y1P22090 263 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 SESN3P58005 492 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 SIRPAP78324 504 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 PLAURQ03405 335 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 FADDQ13158 208 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 SELENBP1Q13228 472 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 CYP51A1Q16850 503 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 SPATS1Q496A3 300 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 RABL3Q5HYI8 236 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 PDSS1Q5T2R2 415 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 GCNT6Q5T4J0 391 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 MRPL2Q5T653 305 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 AP1ARQ63HQ0 302 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 OR2A2Q6IF42 318 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 ESPNLQ6ZVH7 1005 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 GDF7Q7Z4P5 450 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 LUZP2Q86TE4 346 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 VRK2Q86Y07 508 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 OR52P1PQ8NH57 321 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM234Q8WY98 164 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 ST8SIA1Q92185 356 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 CNOT9Q92600 299 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 ZDHHC16Q969W1 377 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 ADGRG7Q96K78 797 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 KCTD14Q9BQ13 255 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 TREX2Q9BQ50 279 aaPredicted RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 TRIM8Q9BZR9 551 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 CACYBPQ9HB71 228 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 DNAJB12Q9NXW2 375 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 TMEM181Q9P2C4 612 aa11.9□□□□□ -0.5
RPAIN-216ENST00000575599 MCTS1Q9ULC4 181 aaKnown RBP11.9□□□□□ -0.5
RPAIN-216ENST00000575599 DSPPQ9NZW4 1301 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 PKDREJQ9NTG1 2253 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ADGRG4Q8IZF6 3080 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 CACNA1DQ01668 2161 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 TRBV5-3A0A0A0MS03 114 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 A0A1W2PNV4 684 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 GJE1A6NN92 205 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 C5orf58C9J3I9 102 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ANKRD65E5RJM6 399 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 ADAMDEC1O15204 470 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 GSTA4O15217 222 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 TNFSF13O75888 250 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 SMNDC1O75940 238 aaKnown RBP eCLIP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 PDE5AO76074 875 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 AQP8O94778 261 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 SYNGR4O95473 234 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 NTN1O95631 604 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 NID1P14543 1247 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 TCN1P20061 433 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 SLC7A1P30825 629 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 SLC6A8P48029 635 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 DLX5P56178 289 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 LIPEQ05469 1076 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 MERTKQ12866 999 aa11.89□□□□□ -0.51
RPAIN-216ENST00000575599 TMEM176BQ3YBM2 270 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-216ENST00000575599 LIN52Q52LA3 116 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms