RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 C8orf82Q6P1X6 216 aaPredicted RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 FAM214BQ7L5A3 538 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 GDF7Q7Z4P5 450 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 SERPINA11Q86U17 422 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 CALHM3Q86XJ0 350 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 TREML1Q86YW5 311 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 TMCO5AQ8N6Q1 288 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 TSPEARQ8WU66 669 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 DTNBP1Q96EV8 351 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 LURAP1Q96LR2 239 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 CGREF1Q99674 301 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 PSD2Q9BQI7 771 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 OR11A1Q9GZK7 315 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 ADAM19Q9H013 955 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 OPN3Q9H1Y3 402 aaPredicted RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 KAT8Q9H7Z6 458 aaKnown RBP7.74□□□□□ -1.17
SMG6-216ENST00000575176 KLHL14Q9P2G3 628 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 KCNN3Q9UGI6 736 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 OSGIN1Q9UJX0 560 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 USP22Q9UPT9 525 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 TESMINQ9Y4I5 508 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 CREBBPQ92793 2442 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 PLCE1Q9P212 2302 aa7.74□□□□□ -1.17
SMG6-216ENST00000575176 ROS1P08922 2347 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 IGKV1D-42A0A075B6H8 117 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 IGHV3-15A0A0B4J1V0 119 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 TMEM72A0PK05 275 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 EEF1E1-BLOC1S5C9J1V9 151 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 H3BNH8 94 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 MSTNO14793 375 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 EEF1E1O43324 174 aaKnown RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 LYPD3O95274 346 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GKN3PP0CG01 181 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 NR2F1P10589 423 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 IMPDH2P12268 514 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 FCGR2AP12318 317 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 PGCP20142 388 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 ENPP1P22413 925 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GCKP35557 465 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 CCR4P51679 360 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 CRISP3P54108 245 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 EGR4Q05215 589 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 DMTNQ08495 405 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 SF3A3Q12874 501 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG6-216ENST00000575176 CAPRIN1Q14444 709 aaKnown RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 SF3B4Q15427 424 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMG6-216ENST00000575176 NPTX1Q15818 432 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 TRMT5Q32P41 509 aaKnown RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 LIN52Q52LA3 116 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 SYT14P1Q58G82 188 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 COQ5Q5HYK3 327 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 HBMQ6B0K9 141 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 REP15Q6BDI9 236 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 DHRS4L2Q6PKH6 230 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 C6orf89Q6UWU4 347 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GRINAQ7Z429 371 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 ZZZ3Q8IYH5 903 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GPR32P1Q8NGA4 272 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 OR4D11Q8NGI4 311 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 OR52P1PQ8NH57 321 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 NFKBIDQ8NI38 313 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 BBS10Q8TAM1 723 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 C3orf49Q96BT1 292 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GMPPAQ96IJ6 420 aaPredicted RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 PTDSS2Q9BVG9 487 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 SPATA9Q9BWV2 254 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 MYLK2Q9H1R3 596 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 ACBD3Q9H3P7 528 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 MTHFD2LQ9H903 347 aaPredicted RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 BCO1Q9HAY6 547 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 MCCC2Q9HCC0 563 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 KLHL13Q9P2N7 655 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 GMPR2Q9P2T1 348 aaKnown RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 CHRNA9Q9UGM1 479 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 LEF1Q9UJU2 399 aaPredicted RBP7.73□□□□□ -1.17
SMG6-216ENST00000575176 CLEC4AQ9UMR7 237 aa7.73□□□□□ -1.17
SMG6-216ENST00000575176 NSD1Q96L73 2696 aaPredicted RBP7.72□□□□□ -1.17
SMG6-216ENST00000575176 IGKV3D-15A0A087WSY6 115 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 A0A0G2JPF8 293 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 DEFB108AA8MXU0 73 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 HNRNPCL2B2RXH8 293 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 HNRNPCL3B7ZW38 293 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 FTCDNL1E5RQL4 147 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 GTPBP1O00178 669 aaKnown RBP7.72□□□□□ -1.17
SMG6-216ENST00000575176 CYTIPO60759 359 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 HNRNPCL1O60812 293 aaKnown RBP7.72□□□□□ -1.17
SMG6-216ENST00000575176 CTAG2O75638 210 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 THY1P04216 161 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 THBDP07204 575 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 HNRNPCL4P0DMR1 293 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 ETS2P15036 469 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 NCF2P19878 526 aaPredicted RBP7.72□□□□□ -1.17
SMG6-216ENST00000575176 CD247P20963 164 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 DRD4P21917 467 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 PRKAR1BP31321 381 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 RYKP34925 604 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 SLC1A3P43003 542 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 DIO1P49895 249 aa7.72□□□□□ -1.17
SMG6-216ENST00000575176 ARFIP2P53365 341 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms