RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 COPS7BQ9H9Q2 264 aaPredicted RBP4.34□□□□□ -1.71
PRPF8-211ENST00000574728 MID1IP1Q9NPA3 183 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 SPAG4Q9NPE6 437 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 PNRC2Q9NPJ4 139 aaKnown RBP4.34□□□□□ -1.71
PRPF8-211ENST00000574728 RRAGDQ9NQL2 400 aaPredicted RBP4.34□□□□□ -1.71
PRPF8-211ENST00000574728 MS4A12Q9NXJ0 267 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 TAS2R7Q9NYW3 318 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 MAT2BQ9NZL9 334 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 MSRB1Q9NZV6 116 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 ABI3Q9P2A4 366 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 VPS29Q9UBQ0 182 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 GIMAP2Q9UG22 337 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 PHF11Q9UIL8 331 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 ERRFI1Q9UJM3 462 aaPredicted RBP4.34□□□□□ -1.71
PRPF8-211ENST00000574728 HAO1Q9UJM8 370 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 SNX6Q9UNH7 406 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 OSGIN2Q9Y236 505 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
PRPF8-211ENST00000574728 ZNF835Q9Y2P0 537 aa4.34□□□□□ -1.71
PRPF8-211ENST00000574728 PCNX1Q96RV3 2341 aa4.34□□□□□ -1.72
PRPF8-211ENST00000574728 ANKHD1Q8IWZ3 2542 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 DIDO1Q9BTC0 2240 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TRBV5-7A0A0A0MS05 114 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 SYNDIG1LA6NDD5 238 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 MYO1GB0I1T2 1018 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 WWP2O00308 870 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 AZIN1O14977 448 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 LSM1O15116 133 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ZNHIT1O43257 154 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 PCDH7O60245 1069 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TBX19O60806 448 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 LYPLA1O75608 230 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 SLC25A12O75746 678 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 RSL1D1O76021 490 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 LDLRP01130 860 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 IL1AP01583 271 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KRT6AP02538 564 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KRT6BP04259 564 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CHRM4P08173 479 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 IL3P08700 152 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 STSP08842 583 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CCL3P10147 92 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 UROSP10746 265 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 GPX3P22352 226 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TIA1P31483 386 aaKnown RBP eCLIP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 SOX3P41225 446 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 MAP3K8P41279 467 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 FRKP42685 505 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KRT6CP48668 564 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 EMDP50402 254 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 MAPK12P53778 367 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 NAA20P61599 178 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ERVK-8P63133 956 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 STX4Q12846 297 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 BIKQ13323 160 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KLF9Q13886 244 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 PDE7AQ13946 482 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 RCN2Q14257 317 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 LTB4RQ15722 352 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 GPR68Q15743 365 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 HYAL4Q2M3T9 481 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 EIF2S3LQ2VIR3 472 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KRT71Q3SY84 523 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 RFTN2Q52LD8 501 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TRMT12Q53H54 448 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CMPK2Q5EBM0 449 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CCNYL2Q5T2Q4 361 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 SLC25A25Q6KCM7 469 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 HMBOX1Q6NT76 420 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CYP20A1Q6UW02 462 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 NPSR1Q6W5P4 371 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TMEM64Q6YI46 380 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 HSDL2Q6YN16 418 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 GALNTL5Q7Z4T8 443 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 RIMKLAQ8IXN7 391 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CPSF7Q8N684 471 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TNIP2Q8NFZ5 429 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 OR4K14Q8NGD5 310 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 FAM76AQ8TAV0 307 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ZNF675Q8TD23 568 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 RAB40AQ8WXH6 277 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 DAZLQ92904 295 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CNDP1Q96KN2 507 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 VSTM2LQ96N03 204 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 UTP23Q9BRU9 249 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 OR8D2Q9GZM6 311 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 WWTR1Q9GZV5 400 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ANKRA2Q9H9E1 313 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 MYNNQ9NPC7 610 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 KLHL1Q9NR64 748 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 DECR2Q9NUI1 292 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 TEKT2Q9UIF3 430 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ZDHHC2Q9UIJ5 367 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ERVK-11Q9UQG0 969 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 ERVK-19Q9WJR5 959 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 STK38LQ9Y2H1 464 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 YARS2Q9Y2Z4 477 aaKnown RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CHCHD2Q9Y6H1 151 aaPredicted RBP4.33□□□□□ -1.72
PRPF8-211ENST00000574728 CLCA3PQ9Y6N3 262 aa4.33□□□□□ -1.72
PRPF8-211ENST00000574728 MTORP42345 2549 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms