RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 BEX1Q9HBH7 125 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 HAO2Q9NYQ3 351 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 DAPP1Q9UN19 280 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 SHOXO15266 292 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 LDB3O75112 727 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 KAT7O95251 611 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 ENPP1P22413 925 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 AP2S1P53680 142 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-206ENST00000573852 LGALSLQ3ZCW2 172 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-206ENST00000573852 EXOSC6Q5RKV6 272 aaKnown RBP17.6■□□□□ 0.41
SCARF1-206ENST00000573852 SAMD14Q8IZD0 417 aaPredicted RBP17.6■□□□□ 0.41
SCARF1-206ENST00000573852 SMARCD2Q92925 531 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 TMEM168Q9H0V1 697 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 TBC1D29Q9UFV1 150 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 KLF15Q9UIH9 416 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 UNC80Q8N2C7 3258 aa17.6■□□□□ 0.41
SCARF1-206ENST00000573852 TRABD2BA6NFA1 517 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 LRRC72A6NJI9 287 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 LRRN3E7EW58 273 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 TFP02787 698 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SLC35G6P0C7Q6 338 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SULT1A3P0DMM9 295 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SULT1A4P0DMN0 295 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SMIM10L1P0DMW3 83 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 PITPNAQ00169 270 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 KLF9Q13886 244 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 BTN2A1Q7KYR7 527 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 ZAR1Q86SH2 424 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 HGDQ93099 445 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 DACT3Q96B18 629 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 ZMYND19Q96E35 227 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SMIM10Q96HG1 83 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SERINC2Q96SA4 455 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 CRISPLD2Q9H0B8 497 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 LRRN3Q9H3W5 708 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 ZCCHC4Q9H5U6 513 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 AUNIPQ9H7T9 357 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 FGF22Q9HCT0 170 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 OR6C2Q9NZP2 312 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 ABRACLQ9P1F3 81 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 COPZ2Q9P299 210 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 EIF3KQ9UBQ5 218 aaKnown RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 AK6Q9Y3D8 172 aaKnown RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 MEIKINA0A087WXM9 373 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 ZNF593O00488 134 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 FLRT2O43155 660 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 FMO6PO60774 539 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 CTSVO60911 334 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 PEPDP12955 493 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 NT5EP21589 574 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 DRD5P21918 477 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SSTR2P30874 369 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 MAT2AP31153 395 aaKnown RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 GDI2P50395 445 aaKnown RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 FHL1Q13642 323 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 EXOSC7Q15024 291 aaKnown RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SLC38A6Q8IZM9 456 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 TM4SF19Q96DZ7 209 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 PELI1Q96FA3 418 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 DHRS9Q9BPW9 319 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 DPCDQ9BVM2 203 aaPredicted RBP17.59■□□□□ 0.41
SCARF1-206ENST00000573852 IL21RQ9HBE5 538 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 GLTPQ9NZD2 209 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 FLRT3Q9NZU0 649 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 CAMK2AQ9UQM7 478 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 SLC22A7Q9Y694 548 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 COLEC10Q9Y6Z7 277 aa17.59■□□□□ 0.41
SCARF1-206ENST00000573852 A0A1W2PQU0 124 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 GXYLT2A0PJZ3 443 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 OGG1O15527 345 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 GJA4P35212 333 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 RPS11P62280 158 aaKnown RBP eCLIP17.58■□□□□ 0.41
SCARF1-206ENST00000573852 ACTC1P68032 377 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 ACTA1P68133 377 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 SNTB2Q13425 540 aaKnown RBP17.58■□□□□ 0.41
SCARF1-206ENST00000573852 FGFBP1Q14512 234 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 SUZ12Q15022 739 aaKnown RBP17.58■□□□□ 0.41
SCARF1-206ENST00000573852 OR51L1Q8NGJ5 315 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 SLC2A12Q8TD20 617 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 CNOT9Q92600 299 aaKnown RBP17.58■□□□□ 0.41
SCARF1-206ENST00000573852 OR2A5Q96R48 311 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 APOOQ9BUR5 198 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 NARFLQ9H6Q4 476 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 IL23AQ9NPF7 189 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 DLL4Q9NR61 685 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 UCKL1Q9NWZ5 548 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 PTTG3PQ9NZH4 202 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 AUP1Q9Y679 476 aa17.58■□□□□ 0.41
SCARF1-206ENST00000573852 TRBV23OR9-2A0A075B6M9 112 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 B3GALT2O43825 422 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 HPXP02790 462 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 NGFRP08138 427 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 ADRB1P08588 477 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 C5AR1P21730 350 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 TLX1P31314 330 aaPredicted RBP17.58■□□□□ 0.4
SCARF1-206ENST00000573852 POU4F3Q15319 338 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 COL28A1Q2UY09 1125 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 TMEM52Q8NDY8 209 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 FGF13Q92913 245 aa17.58■□□□□ 0.4
SCARF1-206ENST00000573852 PTCHD1Q96NR3 888 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms