RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 C12orf65Q9H3J6 166 aaKnown RBP17.39■□□□□ 0.37
CCDC40-206ENST00000572083 MALT1Q9UDY8 824 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 FIS1Q9Y3D6 152 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 ARFGEF3Q5TH69 2177 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 MEGF8Q7Z7M0 2845 aa17.39■□□□□ 0.37
CCDC40-206ENST00000572083 SLC28A1O00337 649 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 TCF21O43680 179 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 EIF4E2O60573 245 aaKnown RBP17.38■□□□□ 0.37
CCDC40-206ENST00000572083 ITGA2P17301 1181 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 MERTKQ12866 999 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 MLC1Q15049 377 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 IQCCQ4KMZ1 466 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 RFTN2Q52LD8 501 aaPredicted RBP17.38■□□□□ 0.37
CCDC40-206ENST00000572083 SYT14P1Q58G82 188 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 PDZK1Q5T2W1 519 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 OR7E24Q6IFN5 339 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 ZYG11AQ6WRX3 759 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 SYT10Q6XYQ8 523 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 MTDHQ86UE4 582 aaKnown RBP17.38■□□□□ 0.37
CCDC40-206ENST00000572083 MEX3DQ86XN8 651 aaKnown RBP17.38■□□□□ 0.37
CCDC40-206ENST00000572083 WDR31Q8NA23 367 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 ARL8AQ96BM9 186 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 MUS81Q96NY9 551 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 FOXN4Q96NZ1 517 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 TSPYL1Q9H0U9 437 aa17.38■□□□□ 0.37
CCDC40-206ENST00000572083 H3BQF6 201 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 ECHS1P30084 290 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 SESN3P58005 492 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 SKP2Q13309 424 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 PDK3Q15120 406 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 SWI5Q1ZZU3 235 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 MST1LQ2TV78 715 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 CFAP157Q5JU67 520 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 LSRQ86X29 649 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-206ENST00000572083 RFLNBQ8N5W9 214 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 ANKS4BQ8N8V4 417 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 ST8SIA1Q92185 356 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 CCDC126Q96EE4 140 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 BPESC1Q9GZL8 116 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 HEATR1Q9H583 2144 aaKnown RBP17.37■□□□□ 0.37
CCDC40-206ENST00000572083 SERINC1Q9NRX5 453 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 GPATCH2Q9NW75 528 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 FAF1Q9UNN5 650 aaPredicted RBP17.37■□□□□ 0.37
CCDC40-206ENST00000572083 MOKQ9UQ07 419 aa17.37■□□□□ 0.37
CCDC40-206ENST00000572083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCDC40-206ENST00000572083 CENPVL1A0A0U1RR11 272 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 MRPL33O75394 65 aaKnown RBP17.36■□□□□ 0.37
CCDC40-206ENST00000572083 TFPIP10646 304 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 CCT3P49368 545 aaKnown RBP17.36■□□□□ 0.37
CCDC40-206ENST00000572083 SPDYE7PQ495Y7 208 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 GALNTL6Q49A17 601 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 LIPMQ5VYY2 423 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 CASP12Q6UXS9 341 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.36■□□□□ 0.37
CCDC40-206ENST00000572083 OR7A2PQ8NGA2 310 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 OR5D16Q8NGK9 328 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 GRPEL1Q9HAV7 217 aa17.36■□□□□ 0.37
CCDC40-206ENST00000572083 LOC390937A0A1W2PQ73 354 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 LRP5LA4QPB2 252 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SERINC4A6NH21 518 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SCAMP2O15127 329 aaKnown RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SPRY1O43609 319 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 ZNF23P17027 643 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 CFPP27918 469 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SNRPD2P62316 118 aaKnown RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SLC46A3Q7Z3Q1 461 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 R3HCC1LQ7Z5L2 792 aaKnown RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 CCDC103Q8IW40 242 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 OR56A1Q8NGH5 318 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 OR5AK3PQ8NH89 298 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 PIGXQ8TBF5 258 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 ACMSDQ8TDX5 336 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SLC25A43Q8WUT9 341 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 MTERF3Q96E29 417 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 ZHX1-C8orf76Q96EF9 292 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 VRK1Q99986 396 aaPredicted RBP17.35■□□□□ 0.37
CCDC40-206ENST00000572083 LAT2Q9GZY6 243 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 SLC17A5Q9NRA2 495 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 AMDHD2Q9Y303 409 aa17.35■□□□□ 0.37
CCDC40-206ENST00000572083 PDLIM1O00151 329 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 GPR171O14626 319 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 LSM1O15116 133 aaKnown RBP17.34■□□□□ 0.37
CCDC40-206ENST00000572083 LINC00032P0C843 101 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 UBTFL6P0CB48 400 aaPredicted RBP17.34■□□□□ 0.37
CCDC40-206ENST00000572083 LAMP1P11279 417 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 NEFHP12036 1026 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 SRP14P37108 136 aaKnown RBP17.34■□□□□ 0.37
CCDC40-206ENST00000572083 HPCAL1P37235 193 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 ASMTP46597 345 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 NAA20P61599 178 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 CKAP4Q07065 602 aaKnown RBP17.34■□□□□ 0.37
CCDC40-206ENST00000572083 GPR68Q15743 365 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 OLIG3Q7RTU3 272 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 C17orf53Q8N3J3 647 aaPredicted RBP17.34■□□□□ 0.37
CCDC40-206ENST00000572083 TMEM234Q8WY98 164 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 ARL5BQ96KC2 179 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 OR7D2Q96RA2 312 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 TUBB1Q9H4B7 451 aa17.34■□□□□ 0.37
CCDC40-206ENST00000572083 CTPS2Q9NRF8 586 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms