RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 AP4B1Q9Y6B7 739 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 FREM1Q5H8C1 2179 aa6.27□□□□□ -1.41
SMG6-209ENST00000571442 IGHV3-15A0A0B4J1V0 119 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 CFAP73A6NFT4 308 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ZNF814B7Z6K7 855 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 C5orf58C9J3I9 102 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 M0R3H8 397 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 RAMP1O60894 148 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 TNFSF13O75888 250 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 NPPAP01160 153 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 THY1P04216 161 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 T-ENOLP0DO92 83 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 IMPDH2P12268 514 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PGCP20142 388 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PTNP21246 168 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ENPP1P22413 925 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 EDNRAP25101 427 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ELK4P28324 431 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ADH6P28332 368 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 TACR3P29371 465 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PRKAR1BP31321 381 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 TIMP3P35625 211 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 EIF1AXP47813 144 aaKnown RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 KCNJ5P48544 419 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 GSK3BP49841 420 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PSME3P61289 254 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 SLC25A3Q00325 362 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 LIPEQ05469 1076 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 RBBP4Q09028 425 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 SNTB1Q13884 538 aaKnown RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 PON3Q15166 354 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 GUSBP1Q15486 140 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 TMEM176BQ3YBM2 270 aaPredicted RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 RIPPLY2Q5TAB7 128 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 VWA1Q6PCB0 445 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 HACD2Q6Y1H2 254 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 CCDC80Q76M96 950 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 MAMDC2Q7Z304 686 aaPredicted RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 GRINAQ7Z429 371 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 GCNT2Q8N0V5 402 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 LILRA2Q8N149 483 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 MEIOBQ8N635 442 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PCYOX1LQ8NBM8 494 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 FAM156AQ8NDB6 213 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 OR2V1Q8NHB1 315 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ZNF563Q8TA94 476 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ROBO4Q8WZ75 1007 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ST8SIA1Q92185 356 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 RND1Q92730 232 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 PMM1Q92871 262 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 C3orf49Q96BT1 292 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 REXO5Q96IC2 774 aaKnown RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 KLHL15Q96M94 604 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 UCN2Q96RP3 112 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ARHGDIGQ99819 225 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ECSITQ9BQ95 431 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ADAM19Q9H013 955 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 CALHM2Q9HA72 323 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 NPDC1Q9NQX5 325 aaPredicted RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 GID8Q9NWU2 228 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ABCD2Q9UBJ2 740 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ING1Q9UK53 422 aaPredicted RBP6.26□□□□□ -1.41
SMG6-209ENST00000571442 CLEC4AQ9UMR7 237 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 ANGPT4Q9Y264 503 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 CSMD1Q96PZ7 3565 aa6.26□□□□□ -1.41
SMG6-209ENST00000571442 IGKV1D-42A0A075B6H8 117 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TMED7-TICAM2A0A0A6YYA0 188 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 A0A1B0GWA3 101 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TMEM247A6NEH6 219 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 PRORSD1PA6NEY8 169 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 SLC22A20A6NK97 555 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 FAM47E-STBD1D6RA91 191 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LINC01387J3KSC0 135 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 FAAHO00519 579 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 RCBTB2O95199 551 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LYPD3O95274 346 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CLDN14O95500 239 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LGI1O95970 557 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 HOXD4P09016 255 aaPredicted RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 NCK1P16333 377 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 PTGER4P35408 488 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 MSX2P35548 267 aaPredicted RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 GCKP35557 465 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 CPOXP36551 454 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 EIF1P41567 113 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 KIR2DL2P43627 348 aaPredicted RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 PER3P56645 1201 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 EGR4Q05215 589 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 SELENBP1Q13228 472 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 ART3Q13508 389 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 GNA13Q14344 377 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 LARS2Q15031 903 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 ZNF239Q16600 458 aaKnown RBP6.25□□□□□ -1.41
SMG6-209ENST00000571442 NRF1Q16656 503 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 SYT14P1Q58G82 188 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 HBMQ6B0K9 141 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 ZNF787Q6DD87 383 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 TMEM211Q6ICI0 200 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 XKRXQ6PP77 449 aa6.25□□□□□ -1.41
SMG6-209ENST00000571442 WDR88Q6ZMY6 472 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms