RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 CBSLP0DN79 551 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SPP1P10451 314 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CD8BP10966 210 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PIM1P11309 404 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 VPREB1P12018 145 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NR2C1P13056 603 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 HLA-EP13747 358 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC2A4P14672 509 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CD1EP15812 388 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PSMC3P17980 439 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LBPP18428 481 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 DRD1P21728 446 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 FDXRP22570 491 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ME2P23368 584 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 FCARP24071 287 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NTSR1P30989 418 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SPRP35270 261 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CBSP35520 551 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 UGT2B10P36537 528 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 IER3P46695 156 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 HOXA1P49639 335 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 ARL4DP49703 201 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 RGS6P49758 472 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ERFP50548 548 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR2B6P58173 313 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 KCNJ2P63252 427 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ACVR1Q04771 509 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC3A1Q07837 685 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 HYAL1Q12794 435 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ILKQ13418 452 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ELAVL3Q14576 367 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 TAF1AQ15573 450 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CDKN3Q16667 212 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LRRC36Q1X8D7 754 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 EIF2S3LQ2VIR3 472 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 KLHL12Q53G59 568 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 FAM78AQ5JUQ0 283 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 HACD4Q5VWC8 232 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ASPHD2Q6ICH7 369 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NIPAL3Q6P499 406 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ULK3Q6PHR2 472 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 BHLHB9Q6PI77 547 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SYCE2Q6PIF2 218 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PAQR3Q6TCH7 311 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 C5orf46Q6UWT4 87 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ENPP7Q6UWV6 458 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 TMEM107Q6UX40 140 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 LRRN1Q6UXK5 716 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ZNF562Q6V9R5 426 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 KYAT3Q6YP21 454 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CERS6Q6ZMG9 384 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 DPY19L3Q6ZPD9 716 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 MAVSQ7Z434 540 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 GLT6D1Q7Z4J2 308 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NET1Q7Z628 596 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 CLNKQ7Z7G1 428 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ZNF546Q86UE3 836 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ALYREFQ86V81 257 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC35F3Q8IY50 421 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PIANPQ8IYJ0 282 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 PRSS58Q8IYP2 241 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 KIRREL3Q8IZU9 778 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR4N4Q8N0Y3 316 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CYP4Z2PQ8N1L4 340 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 STK40Q8N2I9 435 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 MARVELD2Q8N4S9 558 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 TXNDC5Q8NBS9 432 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC37A3Q8NCC5 494 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 CATSPER1Q8NEC5 780 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR2L5Q8NG80 312 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR2L8Q8NGY9 312 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 OR2V1Q8NHB1 315 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 HM13Q8TCT9 377 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 NEK7Q8TDX7 302 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 WIPF2Q8TF74 440 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 FAR1Q8WVX9 515 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 RNF133Q8WVZ7 376 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ASB5Q8WWX0 329 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ASB15Q8WXK1 588 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC25A28Q96A46 364 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 FUBP1Q96AE4 644 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 HIST1H2AHQ96KK5 128 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SFXN2Q96NB2 322 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 SLC46A1Q96NT5 459 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 MCCC1Q96RQ3 725 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 UBL7Q96S82 380 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 MYADMQ96S97 322 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ZNF184Q99676 751 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 HIST1H2AJQ99878 128 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 P2RY13Q9BPV8 354 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 KXD1Q9BQD3 176 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 EBF4Q9BQW3 602 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 UTP23Q9BRU9 249 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 COPS4Q9BT78 406 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 WRAP53Q9BUR4 548 aaKnown RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 DUSP26Q9BV47 211 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 ST6GALNAC5Q9BVH7 336 aa3.28□□□□□ -1.88
SMG6-208ENST00000570874 GATA5Q9BWX5 397 aaPredicted RBP3.28□□□□□ -1.88
SMG6-208ENST00000570874 NPLQ9BXD5 320 aaPredicted RBP3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms