RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 ADRM1Q16186 407 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 TIGD2Q4W5G0 525 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 HIKESHIQ53FT3 197 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KLHL26Q53HC5 615 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 C1QTNF12Q5T7M4 302 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 C3orf33Q6P1S2 294 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 LRIG3Q6UXM1 1119 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 IKBIPQ70UQ0 350 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 OR51F2Q8NH61 342 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 CEP70Q8NHQ1 597 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 C16orf58Q96GQ5 468 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SLC38A2Q96QD8 506 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KCNS3Q9BQ31 491 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 KATNB1Q9BVA0 655 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 QRSL1Q9H0R6 528 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 G6PC2Q9NQR9 355 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 DDX28Q9NUL7 540 aaKnown RBP9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 MED29Q9NX70 200 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 SIRT5Q9NXA8 310 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 TREM2Q9NZC2 230 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 UPB1Q9UBR1 384 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 FBXO9Q9UK97 447 aaPredicted RBP9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 TMCO1Q9UM00 188 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 PPIAL4AQ9Y536 164 aa9.03□□□□□ -0.96
CTDNEP1-202ENST00000570380 TRAV20A0A0B4J274 112 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 ESPNB1AK53 854 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 GPR171O14626 319 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 EIF3HO15372 352 aaKnown RBP eCLIP9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 SMIM24O75264 130 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 ULK1O75385 1050 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 BCL10O95999 233 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 CRYAAP02489 173 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 ADRA2CP18825 462 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 CALCRP30988 508 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 HSD17B3P37058 310 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 SLC1A3P43003 542 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 CSNK2A1P68400 391 aaPredicted RBP9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 IL1RL1Q01638 556 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 NAAAQ02083 359 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 TGFBR3Q03167 851 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 EXOSC6Q5RKV6 272 aaKnown RBP9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.02□□□□□ -0.971e-6■■■■□ 24.8
CTDNEP1-202ENST00000570380 TSPO2Q5TGU0 170 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 KLHL24Q6TFL4 600 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 CASP12Q6UXS9 341 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 C1QL2Q7Z5L3 287 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 CCDC103Q8IW40 242 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 BPIFB2Q8N4F0 458 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 TEX29Q8N6K0 151 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 COX18Q8N8Q8 333 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 RFWD2Q8NHY2 731 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 C1QTNF5Q9BXJ0 243 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 C1QTNF3Q9BXJ4 246 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 TMPRSS13Q9BYE2 586 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 VPS11Q9H270 941 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 GIN1Q9NXP7 522 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 PPP2R2CQ9Y2T4 447 aa9.02□□□□□ -0.97
CTDNEP1-202ENST00000570380 GTPBP1O00178 669 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ALX3O95076 343 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 TFP02787 698 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ADRA2AP08913 450 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 RBP1P09455 135 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ALOX5P09917 674 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SAGP10523 405 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 CDH2P19022 906 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 COL8A2P25067 703 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 MPGP29372 298 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 GPC1P35052 558 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 THBS4P35443 961 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 GPR6P46095 362 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 LMO4P61968 165 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 POU6F2P78424 691 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 HGFACQ04756 655 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 CLCQ05315 142 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 RASA2Q15283 850 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SYT14P1Q58G82 188 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ELFN2Q5R3F8 820 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ANKRD16Q6P6B7 361 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SZRD1Q7Z422 152 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SPATA21Q7Z572 469 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 CDK20Q8IZL9 346 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SLC35F6Q8N357 371 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 OR5W2Q8NH69 310 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 PIGXQ8TBF5 258 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 METTL6Q8TCB7 284 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 C22orf15Q8WYQ4 148 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 CIDECQ96AQ7 238 aaPredicted RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 MRRFQ96E11 262 aaKnown RBP9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 DNAJA3Q96EY1 480 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 MS4A4EQ96PG1 132 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 PKP2Q99959 881 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 BTBD2Q9BX70 525 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 TPK1Q9H3S4 243 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 ZNF442Q9H7R0 627 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 SEC61A2Q9H9S3 476 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 DYNLRB1Q9NP97 96 aa9.01□□□□□ -0.97
CTDNEP1-202ENST00000570380 POM121CA8CG34 1229 aa9□□□□□ -0.97
CTDNEP1-202ENST00000570380 H3BNH8 94 aa9□□□□□ -0.97
CTDNEP1-202ENST00000570380 HSPA4LO95757 839 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms