RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MKLN1Q9UL63 735 aa13.69□□□□□ -0.22
NME3-211ENST00000568561 A0A096LNT2 108 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 TLDC2A0PJX2 215 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 FAM234BA2RU67 622 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 ZNF724A8MTY0 619 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 A8MV72 311 aaPredicted RBP13.68□□□□□ -0.22
NME3-211ENST00000568561 E7EQL1 145 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 SULT2B1O00204 365 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 SPAG7O75391 227 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 CSTAP01040 98 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 TFPIP10646 304 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 PGS1Q32NB8 556 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 CHRFAM7AQ494W8 412 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 SYT14P1Q58G82 188 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 PODNL1Q6PEZ8 512 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 RIMKLAQ8IXN7 391 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 ST8SIA1Q92185 356 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 COQ8BQ96D53 544 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 SLC35G5Q96KT7 338 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 USB1Q9BQ65 265 aaKnown RBP13.68□□□□□ -0.22
NME3-211ENST00000568561 RHNO1Q9BSD3 238 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 NMUR2Q9GZQ4 415 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 LAT2Q9GZY6 243 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 POU2F3Q9UKI9 436 aa13.68□□□□□ -0.22
NME3-211ENST00000568561 MALRD1Q5VYJ5 2156 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 CIB4A0PJX0 185 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 LYPLA1O75608 230 aaPredicted RBP13.67□□□□□ -0.22
NME3-211ENST00000568561 UGT2B17O75795 530 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 G6PDP11413 515 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 MATN1P21941 496 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 RYKP34925 604 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 FOXG1P55316 489 aaPredicted RBP13.67□□□□□ -0.22
NME3-211ENST00000568561 ZNF141Q15928 474 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 MAPK14Q16539 360 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 C6orf52Q5T4I8 152 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 AGAP6Q5VW22 663 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 OR4F3Q6IEY1 312 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 C11orf71Q6IPW1 123 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 SLC22A25Q6T423 547 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 TMPPEQ6ZT21 453 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 C6orf120Q7Z4R8 191 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 ZNF525Q8N782 197 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 KIF18AQ8NI77 898 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 MOAP1Q96BY2 351 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 C1QTNF6Q9BXI9 259 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 BHLHE41Q9C0J9 482 aaPredicted RBP13.67□□□□□ -0.22
NME3-211ENST00000568561 OR11A1Q9GZK7 315 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 MANSC1Q9H8J5 431 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 EML4Q9HC35 981 aaKnown RBP13.67□□□□□ -0.22
NME3-211ENST00000568561 CTPS2Q9NRF8 586 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 ZDHHC2Q9UIJ5 367 aa13.67□□□□□ -0.22
NME3-211ENST00000568561 CCT8L1PA6NM43 557 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ZNF716A6NP11 495 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 M0R1B8 84 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 DNAJA2O60884 412 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 STX11O75558 287 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 PGM3O95394 542 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 IFNA2P01563 188 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 CCNA2P20248 432 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 PRPS1L1P21108 318 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 TTKP33981 857 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 NTF4P34130 210 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 CSNK2A1P68400 391 aaPredicted RBP13.66□□□□□ -0.22
NME3-211ENST00000568561 NRF1Q16656 503 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 TMEM249Q2WGJ8 235 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 C9orf135Q5VTT2 229 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 FBXW9Q5XUX1 488 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 CLEC2AQ6UVW9 174 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 TMEM108Q6UXF1 575 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 C16orf62Q7Z3J2 963 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 NANOS1Q8WY41 292 aaKnown RBP13.66□□□□□ -0.22
NME3-211ENST00000568561 RAB8BQ92930 207 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 APH1AQ96BI3 265 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ARL8AQ96BM9 186 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 TUBGCP3Q96CW5 907 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ARL5BQ96KC2 179 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ADAD1Q96M93 576 aaKnown RBP13.66□□□□□ -0.22
NME3-211ENST00000568561 PRPF18Q99633 342 aaKnown RBP13.66□□□□□ -0.22
NME3-211ENST00000568561 GRIP2Q9C0E4 1043 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ZNF350Q9GZX5 532 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 OR51I1Q9H343 314 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 PPCSQ9HAB8 311 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 SERINC1Q9NRX5 453 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ACER3Q9NUN7 267 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 MKS1Q9NXB0 559 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 EMC3Q9P0I2 261 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 NOSIPQ9Y314 301 aaKnown RBP13.66□□□□□ -0.22
NME3-211ENST00000568561 SLC25A15Q9Y619 301 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 SVEP1Q4LDE5 3571 aa13.66□□□□□ -0.22
NME3-211ENST00000568561 ARFGEF3Q5TH69 2177 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 IGKV3D-15A0A087WSY6 115 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 GOLGA8QA0A0J9YX86 632 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 GOLGA8OA6NCC3 632 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 GOLGA8NF8WBI6 632 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 PHF1O43189 567 aaPredicted RBP13.65□□□□□ -0.22
NME3-211ENST00000568561 KIAA0513O60268 411 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 PGCP20142 388 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 CD40P25942 277 aa13.65□□□□□ -0.22
NME3-211ENST00000568561 PLAURQ03405 335 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms