RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TM9SF1O15321 606 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 POLR2DO15514 142 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SLITRK3O94933 977 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OPN1MWP04001 364 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 GSTA1P08263 222 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OPN1MW2P0DN77 364 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OPN1MW3P0DN78 364 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 GHRP10912 638 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 IGHV1-2P23083 117 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 IL32P24001 234 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CHMLP26374 656 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ACADVLP49748 655 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SULT1E1P49888 294 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CCNHP51946 323 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 METAP1P53582 386 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 STARD6P59095 220 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DSTNP60981 165 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 RPS6P62753 249 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 MYBPC1Q00872 1141 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SPAG1Q07617 926 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 IFFO1Q0D2I5 559 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CARTPTQ16568 116 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 PARP6Q2NL67 630 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 TMEM52BQ4KMG9 183 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SBK1Q52WX2 424 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 LGSNQ5TDP6 509 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 METTL11BQ5VVY1 283 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OR6B2Q6IFH4 312 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 GALNT17Q6IS24 598 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ZNF544Q6NX49 715 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 NEK5Q6P3R8 708 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ZNF562Q6V9R5 426 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ZYG11AQ6WRX3 759 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CCDC121Q6ZUS5 278 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 NCCRP1Q6ZVX7 275 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 TAF8Q7Z7C8 310 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 TBC1D21Q8IYX1 336 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ST13P4Q8IZP2 240 aaPredicted RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ARHGAP18Q8N392 663 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 LEMD2Q8NC56 503 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DENND6BQ8NEG7 585 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 OR8K3Q8NH51 312 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ENKURQ8TC29 256 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ADAMTS16Q8TE57 1224 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DQX1Q8TE96 717 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 NCLNQ969V3 563 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SGK3Q96BR1 496 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SLC25A36Q96CQ1 311 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 VPS39Q96JC1 886 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 PSKH2Q96QS6 385 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DPH7Q9BTV6 452 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DRC3Q9H069 523 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 FANCEQ9HB96 536 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 VCX3AQ9NNX9 186 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 PLSCR3Q9NRY6 295 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DCAF13Q9NV06 445 aaKnown RBP2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 TMEM9Q9P0T7 183 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 IL19Q9UHD0 177 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 MOSPD1Q9UJG1 213 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 LAMP5Q9UJQ1 280 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CHMP2BQ9UQN3 213 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 NUDCQ9Y266 331 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 DHRS7Q9Y394 339 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CBY1Q9Y3M2 126 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 SCN11AQ9UI33 1791 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 CNTNAP1P78357 1384 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 TJP1Q07157 1748 aa2.71□□□□□ -1.98
HERPUD1-212ENST00000567944 ELP1O95163 1332 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 SLX4Q8IY92 1834 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 SZT2Q5T011 3432 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 SMG6Q86US8 1419 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 LAMB1P07942 1786 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 TRBV7-9A0A0J9YWB2 115 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 LOC100653049A0A140TA62 436 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 SYCE3A1L190 88 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 CFAP73A6NFT4 308 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 EPOPA6NHQ4 379 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 H0YL77 283 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 GOLGA8RI6L899 631 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 L7N2F9 121 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 UBXN8O00124 270 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 TRDMT1O14717 391 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 HAT1O14929 419 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 RNF113AO15541 343 aaKnown RBP2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 KRT34O76011 436 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 APBB3O95704 486 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 KRT6AP02538 564 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 MT-ND3P03897 115 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 KRT6BP04259 564 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 KRT7P08729 469 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 UBTFL6P0CB48 400 aaPredicted RBP2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 ZBTB25P24278 435 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 U2AF2P26368 475 aaKnown RBP eCLIP2.7□□□□□ -1.985e-19■□□□□ 10.6
HERPUD1-212ENST00000567944 SFNP31947 248 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 PRDX2P32119 198 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 IFNAR2P48551 515 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 SERPINB8P50452 374 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 RIPPLY3P57055 190 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 S100A12P80511 92 aa2.7□□□□□ -1.98
HERPUD1-212ENST00000567944 MRPS6P82932 125 aaKnown RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms