RNA–Protein interactions for RNA: ENST00000567943.1

FANCA-228, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 860 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-228ENST00000567943 LEF1Q9UJU2 399 aaPredicted RBP22.5■■□□□ 1.19
FANCA-228ENST00000567943 CLEC4AQ9UMR7 237 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 DSPPQ9NZW4 1301 aa22.5■■□□□ 1.19
FANCA-228ENST00000567943 ATP8B1O43520 1251 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 ADAM11O75078 769 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 CD8BP10966 210 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 BMP2P12643 396 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 CCKARP32238 428 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 PCYT1AP49585 367 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 CGB2Q6NT52 195 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 PLEKHM3Q6ZWE6 761 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 VRK2Q86Y07 508 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 CDC20BQ86Y33 519 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 SRXN1Q9BYN0 137 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 A4GALTQ9NPC4 353 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 TIGARQ9NQ88 270 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.49■■□□□ 1.19
FANCA-228ENST00000567943 NDUFAF1Q9Y375 327 aa22.49■■□□□ 1.19
FANCA-228ENST00000567943 TRBV5-3A0A0A0MS03 114 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 A0A0G2JPF8 293 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 HNRNPCL2B2RXH8 293 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 HNRNPCL3B7ZW38 293 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 AP3D1O14617 1153 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 HNRNPCL1O60812 293 aaKnown RBP22.48■■□□□ 1.19
FANCA-228ENST00000567943 HNRNPCL4P0DMR1 293 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 PPIBP23284 216 aaKnown RBP22.48■■□□□ 1.19
FANCA-228ENST00000567943 SLC7A1P30825 629 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 ARFIP2P53365 341 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 LIN52Q52LA3 116 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 C3orf33Q6P1S2 294 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 ZNF836Q6ZNA1 936 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 C10orf111Q8N326 155 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 ROBO4Q8WZ75 1007 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 DACH2Q96NX9 599 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 CCDC134Q9H6E4 229 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 COQ10BQ9H8M1 238 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 SERINC1Q9NRX5 453 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 RLIMQ9NVW2 624 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 FREM1Q5H8C1 2179 aa22.48■■□□□ 1.19
FANCA-228ENST00000567943 ITPR3Q14573 2671 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 A0A1W2PNR3 127 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 SH3D21A4FU49 640 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 ANGPT2O15123 496 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 SS18L1O75177 396 aaPredicted RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 PLGP00747 810 aaPredicted RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 CD79BP40259 229 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 IDH2P48735 452 aaKnown RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 ZNF239Q16600 458 aaKnown RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 DLEU7Q6UYE1 221 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 CPNE4Q96A23 557 aaPredicted RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 GMPPAQ96IJ6 420 aaPredicted RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 IKZF5Q9H5V7 419 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 CTPS2Q9NRF8 586 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 ZNF443Q9Y2A4 671 aaPredicted RBP22.47■■□□□ 1.19
FANCA-228ENST00000567943 TESMINQ9Y4I5 508 aa22.47■■□□□ 1.19
FANCA-228ENST00000567943 A0A1W2PPR1 153 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 C5orf58C9J3I9 102 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 MDH1P40925 334 aaKnown RBP22.46■■□□□ 1.19
FANCA-228ENST00000567943 APOBEC1P41238 236 aaKnown RBP22.46■■□□□ 1.19
FANCA-228ENST00000567943 GCNT6Q5T4J0 391 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 C22orf34Q6ZV56 151 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 GRINAQ7Z429 371 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 DHDDSQ86SQ9 333 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 RETREG3Q86VR2 466 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 REXO5Q96IC2 774 aaKnown RBP22.46■■□□□ 1.19
FANCA-228ENST00000567943 WFIKKN1Q96NZ8 548 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 OR5B2Q96R09 309 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 CCDC106Q9BWC9 280 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 CACYBPQ9HB71 228 aaKnown RBP22.46■■□□□ 1.19
FANCA-228ENST00000567943 PLSCR4Q9NRQ2 329 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 EMC9Q9Y3B6 208 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 GMEB1Q9Y692 573 aa22.46■■□□□ 1.19
FANCA-228ENST00000567943 PRR14LQ5THK1 2151 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 CDHR4A6H8M9 788 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 CFAP73A6NFT4 308 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 EVPLLA8MZ36 301 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 HRGP04196 525 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 UGT2B10P36537 528 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 IST1P53990 364 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 CTBP2P56545 445 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 LARS2Q15031 903 aaKnown RBP22.45■■□□□ 1.18
FANCA-228ENST00000567943 PRAMEF8Q5VWM4 474 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 PRAMEF7Q5VXH5 474 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 LSRQ86X29 649 aaPredicted RBP22.45■■□□□ 1.18
FANCA-228ENST00000567943 DPP10Q8N608 796 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 NFKBIDQ8NI38 313 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 BBS10Q8TAM1 723 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 TSPEARQ8WU66 669 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 CPPED1Q9BRF8 314 aaPredicted RBP22.45■■□□□ 1.18
FANCA-228ENST00000567943 BCL2L10Q9HD36 194 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 PROCRQ9UNN8 238 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 ZNF232Q9UNY5 417 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 CORO2BQ9UQ03 480 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 MED13LQ71F56 2210 aa22.45■■□□□ 1.18
FANCA-228ENST00000567943 SIAH2O43255 324 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 PGM3O95394 542 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 THBS1P07996 1170 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 PABPC4LP0CB38 370 aaKnown RBP22.44■■□□□ 1.18
FANCA-228ENST00000567943 GKN3PP0CG01 181 aa22.44■■□□□ 1.18
FANCA-228ENST00000567943 ARAFP10398 606 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms