RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 RAP2CQ9Y3L5 183 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 WDR45Q9Y484 360 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 KCNE3Q9Y6H6 103 aa16.52■□□□□ 0.24
LINC01238-205ENST00000567549 A0A1W2PNR3 127 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 EFNA2O43921 213 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 DNAJA2O60884 412 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 TP53P04637 393 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 UBTFL6P0CB48 400 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 TFPIP10646 304 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 GGT1P19440 569 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 CHI3L1P36222 383 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 DIO1P49895 249 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 MAP2K6P52564 334 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 VEZF1Q14119 521 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 ZNF672Q499Z4 452 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 TNFAIP8L3Q5GJ75 292 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 OR4F3Q6IEY1 312 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 KLHL17Q6TDP4 642 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 TMPPEQ6ZT21 453 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 CIARTQ8N365 385 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 PIGXQ8TBF5 258 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 SMAP2Q8WU79 429 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 OR51I1Q9H343 314 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.51■□□□□ 0.23
LINC01238-205ENST00000567549 HDGFL3Q9Y3E1 203 aa16.51■□□□□ 0.23
LINC01238-205ENST00000567549 OIP5O43482 229 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 TYROBPO43914 113 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 UGT2B17O75795 530 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 PLAUP00749 431 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 PCSK6P29122 969 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 RPL14P50914 215 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 SESN3P58005 492 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 ABCE1P61221 599 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 MAGOHP61326 146 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 STK11Q15831 433 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 PDCD2Q16342 344 aaPredicted RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 NRF1Q16656 503 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 CLEC12BQ2HXU8 276 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 NDUFAF6Q330K2 333 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 HEPHL1Q6MZM0 1159 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 GRINAQ7Z429 371 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 MTDHQ86UE4 582 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 CMIPQ8IY22 773 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 DEPDC4Q8N2C3 294 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 XAGE5Q8WWM1 108 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 PMM1Q92871 262 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 HS6ST2Q96MM7 605 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 GRIP2Q9C0E4 1043 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 EXOSC3Q9NQT5 275 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 CHRNA9Q9UGM1 479 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 MKLN1Q9UL63 735 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 LIPT1Q9Y234 373 aa16.5■□□□□ 0.23
LINC01238-205ENST00000567549 NOSIPQ9Y314 301 aaKnown RBP16.5■□□□□ 0.23
LINC01238-205ENST00000567549 USF3Q68DE3 2245 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 SMAD9O15198 467 aaKnown RBP16.49■□□□□ 0.23
LINC01238-205ENST00000567549 KIAA0513O60268 411 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 PMS2P2O95744 297 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 LBPP18428 481 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 ETV4P43268 484 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 RPS26P62854 115 aaKnown RBP16.49■□□□□ 0.23
LINC01238-205ENST00000567549 CHI3L2Q15782 390 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 OR7E24Q6IFN5 339 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 TMEM108Q6UXF1 575 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 CLECL1Q8IZS7 167 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 ZNF619Q8N2I2 560 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 UBE2J2Q8N2K1 259 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 RAB3IL1Q8TBN0 382 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 APH1AQ96BI3 265 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 AKTIPQ9H8T0 292 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 MARCOQ9UEW3 520 aaPredicted RBP16.49■□□□□ 0.23
LINC01238-205ENST00000567549 ADAM21Q9UKJ8 722 aa16.49■□□□□ 0.23
LINC01238-205ENST00000567549 FREM1Q5H8C1 2179 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 VPS13CQ709C8 3753 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 IGHV3-15A0A0B4J1V0 119 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 CIB4A0PJX0 185 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 OVOL3O00110 214 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 EIF1BO60739 113 aaKnown RBP16.48■□□□□ 0.23
LINC01238-205ENST00000567549 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
LINC01238-205ENST00000567549 COX5AP20674 150 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 S100A3P33764 101 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 MAGEA8P43361 318 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 RNF144AP50876 292 aaPredicted RBP16.48■□□□□ 0.23
LINC01238-205ENST00000567549 BSPH1Q075Z2 132 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 GPAT3Q53EU6 434 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 AGAP6Q5VW22 663 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 FBXW9Q5XUX1 488 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 AP1ARQ63HQ0 302 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 ROPN1LQ96C74 230 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 DDIT4LQ96D03 193 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 NEURL3Q96EH8 262 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 ADAD1Q96M93 576 aaKnown RBP16.48■□□□□ 0.23
LINC01238-205ENST00000567549 KLHDC3Q9BQ90 382 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 SAP130Q9H0E3 1048 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 PARPBPQ9NWS1 579 aa16.48■□□□□ 0.23
LINC01238-205ENST00000567549 IGKV3D-15A0A087WSY6 115 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 OR5H1A6NKK0 313 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 ZNF814B7Z6K7 855 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 E9PBE3 544 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 FCMRO60667 390 aa16.47■□□□□ 0.23
LINC01238-205ENST00000567549 MRPL33O75394 65 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms