RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 INPP5KQ9BT40 448 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 PRR14Q9BWN1 585 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 EML4Q9HC35 981 aaKnown RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 PSMC3IPQ9P2W1 217 aaPredicted RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 DCDC2Q9UHG0 476 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 KCNS2Q9ULS6 477 aa13.59□□□□□ -0.23
PALB2-205ENST00000567003 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
PALB2-205ENST00000567003 TENM1Q9UKZ4 2725 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 SULT2B1O00204 365 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 EIF4E2O60573 245 aaKnown RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 PLIN3O60664 434 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 GLRA3O75311 464 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 BCAS1O75363 584 aaPredicted RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 TFPIP10646 304 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 HPCAL1P37235 193 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 GZMKP49863 264 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 DNAJB13P59910 316 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 SKP2Q13309 424 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 MLC1Q15049 377 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 GABRA6Q16445 453 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 CARTPTQ16568 116 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 FAM166AQ6J272 317 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 TMPPEQ6ZT21 453 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 WDR31Q8NA23 367 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 OR56A1Q8NGH5 318 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 MSI2Q96DH6 328 aaKnown RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 SERHL2Q9H4I8 314 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 EMC3Q9P0I2 261 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 ATP6V1HQ9UI12 483 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 KCNE5Q9UJ90 142 aa13.58□□□□□ -0.24
PALB2-205ENST00000567003 FAF1Q9UNN5 650 aaPredicted RBP13.58□□□□□ -0.24
PALB2-205ENST00000567003 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.24
PALB2-205ENST00000567003 IGKV3D-15A0A087WSY6 115 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 IGHV4-61A0A0C4DH41 118 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 SERINC4A6NH21 518 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 ATP6V1G2-DDX39BF2Z307 99 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 H3BQF6 201 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 UBTFL6P0CB48 400 aaPredicted RBP13.57□□□□□ -0.24
PALB2-205ENST00000567003 NEFHP12036 1026 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 ASMTP46597 345 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 GPR68Q15743 365 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 SYT14P1Q58G82 188 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 R3HCC1LQ7Z5L2 792 aaKnown RBP13.57□□□□□ -0.24
PALB2-205ENST00000567003 MTDHQ86UE4 582 aaKnown RBP13.57□□□□□ -0.24
PALB2-205ENST00000567003 CCDC103Q8IW40 242 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 CLEC4FQ8N1N0 589 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 DEPDC4Q8N2C3 294 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 CCDC63Q8NA47 563 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 MTERF3Q96E29 417 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 FBXO17Q96EF6 278 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 C1orf159Q96HA4 380 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 SORCS2Q96PQ0 1159 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 SDF2Q99470 211 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 LAT2Q9GZY6 243 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 OXSMQ9NWU1 459 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 ASB6Q9NWX5 421 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 TAS2R16Q9NYV7 291 aa13.57□□□□□ -0.24
PALB2-205ENST00000567003 VWC2LB2RUY7 222 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 CSF3P09919 207 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 APEHP13798 732 aaKnown RBP13.56□□□□□ -0.24
PALB2-205ENST00000567003 CPA3P15088 417 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 THBS2P35442 1172 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 SOAT1P35610 550 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 PDLIM4P50479 330 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 CSNK2A1P68400 391 aaPredicted RBP13.56□□□□□ -0.24
PALB2-205ENST00000567003 PTGR1Q14914 329 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 WHAMMP3Q1A5X7 153 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 KANK2Q63ZY3 851 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 SSX8Q7RTT4 187 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 HMGN2P46Q86SG4 172 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 C10orf107Q8IVU9 208 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 DDIASQ8IXT1 998 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 KRTCAP2Q8N6L1 136 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 ANKS4BQ8N8V4 417 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 OR5P2Q8WZ92 322 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 ST8SIA1Q92185 356 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 ARL5BQ96KC2 179 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 SOX7Q9BT81 388 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 C1orf50Q9BV19 199 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 GATA5Q9BWX5 397 aaPredicted RBP13.56□□□□□ -0.24
PALB2-205ENST00000567003 OR11A1Q9GZK7 315 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 CTPS2Q9NRF8 586 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 DNAJC15Q9Y5T4 150 aa13.56□□□□□ -0.24
PALB2-205ENST00000567003 PIP5K1BO14986 540 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 KIAA0513O60268 411 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 FCMRO60667 390 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 CHRNGP07510 517 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 FAM153BP0C7A2 387 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 CCNA2P20248 432 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 NR4A2P43354 598 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 NAA20P61599 178 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 PHC1P78364 1004 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 CHRNB3Q05901 458 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 PDK3Q15120 406 aa13.55□□□□□ -0.24
PALB2-205ENST00000567003 MAPK14Q16539 360 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms