RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 ADAP00813 363 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 FKBP2P26885 142 aaKnown RBP17.91■□□□□ 0.46
CLN6-207ENST00000566347 OR3A2P47893 321 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 DIO1P49895 249 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 NME5P56597 212 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 UFM1P61960 85 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 ITGADQ13349 1161 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 TMPPEQ6ZT21 453 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 Q6ZT83 130 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 YTHDF3Q7Z739 585 aaKnown RBP17.91■□□□□ 0.46
CLN6-207ENST00000566347 TMEM171Q8WVE6 324 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 PERPQ96FX8 193 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 TEX37Q96LM6 180 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 TRNT1Q96Q11 434 aaKnown RBP17.91■□□□□ 0.46
CLN6-207ENST00000566347 ING1Q9UK53 422 aaPredicted RBP17.91■□□□□ 0.46
CLN6-207ENST00000566347 LIPT1Q9Y234 373 aa17.91■□□□□ 0.46
CLN6-207ENST00000566347 TMEM120BA0PK00 339 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 CCDC154A6NI56 674 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 SLCO1B7G3V0H7 640 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 SULT2B1O00204 365 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 HMGN4O00479 90 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 HS3ST1O14792 307 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 SNNO75324 88 aaPredicted RBP17.9■□□□□ 0.46
CLN6-207ENST00000566347 PGRP06401 933 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 HOXB4P17483 251 aaPredicted RBP17.9■□□□□ 0.46
CLN6-207ENST00000566347 WDR4P57081 412 aaKnown RBP17.9■□□□□ 0.46
CLN6-207ENST00000566347 KCNJ10P78508 379 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ATG16L1Q676U5 607 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 GRINAQ7Z429 371 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 RNF130Q86XS8 419 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 CMIPQ8IY22 773 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ARFGAP2Q8N6H7 521 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ZNF611Q8N823 705 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 GLB1L3Q8NCI6 653 aaPredicted RBP17.9■□□□□ 0.46
CLN6-207ENST00000566347 RAB3IL1Q8TBN0 382 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 IGFBPL1Q8WX77 278 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ZBTB9Q96C00 473 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ZHX1-C8orf76Q96EF9 292 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 Q96MF0 132 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 OR52E6Q96RD3 313 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 BDH2Q9BUT1 245 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 CCDC106Q9BWC9 280 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 POTEKPQ9BYX7 375 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 CXorf56Q9H5V9 222 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ESRP2Q9H6T0 727 aaKnown RBP17.9■□□□□ 0.46
CLN6-207ENST00000566347 EMC3Q9P0I2 261 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 CHRNA9Q9UGM1 479 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 GPR45Q9Y5Y3 372 aa17.9■□□□□ 0.46
CLN6-207ENST00000566347 ZNF814B7Z6K7 855 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 CNOT4O95628 575 aaKnown RBP17.89■□□□□ 0.45
CLN6-207ENST00000566347 PLAUP00749 431 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 FESP07332 822 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 TFPIP10646 304 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 PAX1P15863 534 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 RYKP34925 604 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 PTH2RP49190 550 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 CLK1P49759 484 aaKnown RBP17.89■□□□□ 0.45
CLN6-207ENST00000566347 SLC18A1P54219 525 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 CHRNEQ04844 493 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 TSC22D1Q15714 1073 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 TAB1Q15750 504 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 ALKBH2Q6NS38 261 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 BHLHA15Q7RTS1 189 aaPredicted RBP17.89■□□□□ 0.45
CLN6-207ENST00000566347 GALNT5Q7Z7M9 940 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 MTDHQ86UE4 582 aaKnown RBP17.89■□□□□ 0.45
CLN6-207ENST00000566347 ZG16BQ96DA0 208 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 COX4I2Q96KJ9 171 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 CTPS2Q9NRF8 586 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 HDGFL3Q9Y3E1 203 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 RNF115Q9Y4L5 304 aa17.89■□□□□ 0.45
CLN6-207ENST00000566347 NSD1Q96L73 2696 aaPredicted RBP17.89■□□□□ 0.45
CLN6-207ENST00000566347 GOLGA8QA0A0J9YX86 632 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 PRAMEF27A3QJZ7 478 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 GOLGA8OA6NCC3 632 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 GOLGA8NF8WBI6 632 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 DNPH1O43598 174 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 BCAS1O75363 584 aaPredicted RBP17.88■□□□□ 0.45
CLN6-207ENST00000566347 EPHA3P29320 983 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 IL12AP29459 219 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 HTR3AP46098 478 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 GNA13Q14344 377 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 CAPRIN1Q14444 709 aaKnown RBP17.88■□□□□ 0.45
CLN6-207ENST00000566347 PDK3Q15120 406 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 ABLIM2Q6H8Q1 611 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 ADAM5Q6NVV9 412 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 CLEC9AQ6UXN8 241 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 LRRC74BQ6ZQY2 392 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 ZNF621Q6ZSS3 439 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 SSX8Q7RTT4 187 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 ZNF100Q8IYN0 542 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 MGARPQ8TDB4 240 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 AKAP1Q92667 903 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLN6-207ENST00000566347 ZNF75CPQ92670 426 aaPredicted RBP17.88■□□□□ 0.45
CLN6-207ENST00000566347 PMM1Q92871 262 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 ZNF300Q96RE9 604 aaPredicted RBP17.88■□□□□ 0.45
CLN6-207ENST00000566347 SMR3AQ99954 134 aa17.88■□□□□ 0.45
CLN6-207ENST00000566347 WDR55Q9H6Y2 383 aaPredicted RBP17.88■□□□□ 0.45
CLN6-207ENST00000566347 IGKV3D-15A0A087WSY6 115 aa17.87■□□□□ 0.45
CLN6-207ENST00000566347 AGAP5A6NIR3 686 aa17.87■□□□□ 0.45
CLN6-207ENST00000566347 C9JVG2 144 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms