RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 GOLGA2P5Q9HBQ8 144 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 BABAM2Q9NXR7 383 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 A3GALT2U3KPV4 340 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 A8MUA0 341 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 EIF4EP06730 217 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 MMP7P09237 267 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 CRHBPP24387 322 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 MTNR1BP49286 362 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 INCA1Q0VD86 236 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 GRB7Q14451 532 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 OR52W1Q6IF63 320 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RBM23Q86U06 439 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 PDZD3Q86UT5 571 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 OR9K2Q8NGE7 335 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 REEP6Q96HR9 211 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 DUSP22Q9NRW4 184 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 COQ3Q9NZJ6 369 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 ZNF337Q9Y3M9 751 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RIPK3Q9Y572 518 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 hCG_1809904A0A1W2PP81 198 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 A0A1W2PPE2 198 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 A0A1W2PR64 198 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 A0A1W2PRV1 198 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 PLSCR5A0PG75 271 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 YY2O15391 372 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 AQP9O43315 295 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 SNNO75324 88 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 RGS11O94810 467 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 JUNDP17535 347 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 MAOBP27338 520 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HOXA10P31260 410 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 CPOXP36551 454 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 GABRA2P47869 451 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HNRNPA3P51991 378 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 EMP2P54851 167 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 TMEM115Q12893 351 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 SERTAD2Q14140 314 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 LRRC73Q5JTD7 316 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 TMEM71Q6P5X7 295 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 BOLLQ8N9W6 283 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 KNL1Q8NG31 2342 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 TCRBV7S3A2A0A539 114 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 C8AP07357 584 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 ARAFP10398 606 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 ZNF28P17035 718 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 WASP42768 502 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HOXA1P49639 335 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 TBPL1P62380 186 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RPS24P62847 133 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 GUK1Q16774 197 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RBMXL3Q8N7X1 1067 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 HUS1BQ8NHY5 278 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 GGHQ92820 318 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 GATA6Q92908 595 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 IMP4Q96G21 291 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 SIGLEC10Q96LC7 697 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 VAMP8Q9BV40 100 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 PCDHAC2Q9Y5I4 1007 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 NPIPA5A0A0B4J1W7 369 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 TCRBV3S1A0A5B6 114 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 KIAA0355O15063 1070 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 S1PR4O95977 384 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 DHRS4L1P0CG22 281 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HLA-DMAP28067 261 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 ATP1B3P54709 279 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 OPCMLQ14982 345 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RPE65Q16518 533 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 CPZQ66K79 652 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 FBXW12Q6X9E4 464 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 MDGA2Q7Z553 956 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 NRMQ8IXM6 262 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 IL1F10Q8WWZ1 152 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 MR1Q95460 341 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 TMEM59Q9BXS4 323 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 ACKR4Q9NPB9 350 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 DNAJB11Q9UBS4 358 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 CFAP20Q9Y6A4 193 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 RNF225M0QZC1 329 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 LCATP04180 440 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 RPL7P18124 248 aaKnown RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 POLR2CP19387 275 aaPredicted RBP4.79□□□□□ -1.64
SMG1-211ENST00000565324 LMO2P25791 158 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 DGKEP52429 567 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 PTPRCAPQ14761 206 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 LTB4RQ15722 352 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 C22orf39Q6P5X5 142 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 OR13C9Q8NGT0 318 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 OR14L1PQ8NHC6 308 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 BPIFA2Q96DR5 249 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HRASLS2Q9NWW9 162 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 HRH3Q9Y5N1 445 aa4.79□□□□□ -1.64
SMG1-211ENST00000565324 SLC16A6O15403 523 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 ADAMTS4O75173 837 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 USP2O75604 605 aaPredicted RBP4.78□□□□□ -1.64
SMG1-211ENST00000565324 BMP4P12644 408 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 MPPED2Q15777 294 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 VAMP3Q15836 100 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SOWAHAQ2M3V2 549 aa4.78□□□□□ -1.64
SMG1-211ENST00000565324 SLX4IPQ5VYV7 408 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms