RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 MERTKQ12866 999 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 TAB1Q15750 504 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 NDUFAF6Q330K2 333 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 SYT14P1Q58G82 188 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 C1QTNF12Q5T7M4 302 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 TYW3Q6IPR3 259 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 BHLHA15Q7RTS1 189 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 GRINAQ7Z429 371 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 SPATA19Q7Z5L4 167 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF619Q8N2I2 560 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 FAM71CQ8NEG0 241 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 PIWIL2Q8TC59 973 aaKnown RBP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 AKAP1Q92667 903 aaKnown RBP eCLIP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 ROPN1LQ96C74 230 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 MUCL1Q96DR8 90 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 RADILQ96JH8 1075 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 PKNOX2Q96KN3 472 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 CCDC115Q96NT0 180 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 OR5B2Q96R09 309 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 SORT1Q99523 831 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 SMR3AQ99954 134 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 PARD6BQ9BYG5 372 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 C20orf27Q9GZN8 174 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 MTHFD2LQ9H903 347 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 ING1Q9UK53 422 aaPredicted RBP10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 TRAPPC4Q9Y296 219 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 FREM1Q5H8C1 2179 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 PRR14LQ5THK1 2151 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 USF3Q68DE3 2245 aa10.81□□□□□ -0.68
GTF3C1-204ENST00000564664 E9PBE3 544 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 SLCO1B7G3V0H7 640 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 OVOL3O00110 214 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 SMAD9O15198 467 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 PGM3O95394 542 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 PMS2P2O95744 297 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 PLAUP00749 431 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 CHI3L1P36222 383 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ATP5J2P56134 94 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 HPCAP84074 193 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 GNA13Q14344 377 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 CAPRIN1Q14444 709 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 MAPK14Q16539 360 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 TIMM23BQ5SRD1 257 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF100Q8IYN0 542 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ARFGAP2Q8N6H7 521 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 GLB1L3Q8NCI6 653 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF563Q8TA94 476 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF75CPQ92670 426 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 FBXW5Q969U6 566 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 GTPBP3Q969Y2 492 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF524Q96C55 264 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 TRNT1Q96Q11 434 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 CCDC106Q9BWC9 280 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 GRIP2Q9C0E4 1043 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 KCNK9Q9NPC2 374 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 MARCOQ9UEW3 520 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 CHRNA9Q9UGM1 479 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 RAB21Q9UL25 225 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 HIVEP2P31629 2446 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 CSPG4Q6UVK1 2322 aa10.8□□□□□ -0.68
GTF3C1-204ENST00000564664 TRPC5OSA6NMA1 111 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 FAAHO00519 579 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF208O43345 1280 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 H6PDO95479 791 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 GGT1P19440 569 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 BGNP21810 368 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 RNF144AP50876 292 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 SLC18A1P54219 525 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 FAM174BQ3ZCQ3 159 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 ZNF672Q499Z4 452 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 GPAT3Q53EU6 434 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 SPANXN4Q5MJ08 99 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 FBXW9Q5XUX1 488 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 TNFAIP8L2Q6P589 184 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 FRRS1Q6ZNA5 592 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 LRRC74BQ6ZQY2 392 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 ANKRD46Q86W74 232 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 CLEC4FQ8N1N0 589 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 LILRB1Q8NHL6 650 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 PIGXQ8TBF5 258 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 RAB3IL1Q8TBN0 382 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 SMAP2Q8WU79 429 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 RAB8BQ92930 207 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 PPP1R36Q96LQ0 422 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 ZBTB18Q99592 522 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 SLC35A5Q9BS91 424 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 NUF2Q9BZD4 464 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 THAP1Q9NVV9 213 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 LAMP3Q9UQV4 416 aa10.79□□□□□ -0.68
GTF3C1-204ENST00000564664 TLN2Q9Y4G6 2542 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 IGHV3-15A0A0B4J1V0 119 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 GOLGA8QA0A0J9YX86 632 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 GOLGA8OA6NCC3 632 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 CCDC154A6NI56 674 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 AGAP5A6NIR3 686 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 GOLGA8NF8WBI6 632 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 HMGN4O00479 90 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 HDAC3O15379 428 aa10.78□□□□□ -0.68
GTF3C1-204ENST00000564664 EIF1BO60739 113 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms