RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 A0A0G2JPF8 293 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 HNRNPCL2B2RXH8 293 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 HNRNPCL3B7ZW38 293 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 HNRNPCL1O60812 293 aaKnown RBP16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 PRKD3O94806 890 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 HNRNPCL4P0DMR1 293 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 TFPIP10646 304 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 UQCRBP14927 111 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 PPIBP23284 216 aaKnown RBP16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 FKBP2P26885 142 aaKnown RBP16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 LARS2Q15031 903 aaKnown RBP16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 EXOC3L2Q2M3D2 409 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 HSP90B2PQ58FF3 399 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 PAGE3Q5JUK9 113 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 TMEM201Q5SNT2 666 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 LRIF1Q5T3J3 769 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 MRPL2Q5T653 305 aaKnown RBP16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 FCRLAQ7L513 359 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 STK32CQ86UX6 486 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF440Q8IYI8 595 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 SLC43A2Q8N370 569 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 RNF128Q8TEB7 428 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 TMEM19Q96HH6 336 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 CCDC106Q9BWC9 280 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 ARMC7Q9H6L4 198 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 FANCFQ9NPI8 374 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 SLC52A3Q9NQ40 469 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 CTPS2Q9NRF8 586 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 CHRNA9Q9UGM1 479 aa16.39■□□□□ 0.21
SYNGR3-204ENST00000564642 A0A1W2PP18 115 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 FAM221AA4D161 298 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 C16orf97H3BN30 126 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 AP3D1O14617 1153 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 GOSR1O95249 250 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 ENPP1P22413 925 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 AGTR1P30556 359 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 HTR3AP46098 478 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 CSNK2A1P68400 391 aaPredicted RBP16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 PLAURQ03405 335 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 SYT14P1Q58G82 188 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 VRK2Q86Y07 508 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 ABHD3Q8WU67 409 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 C12orf49Q9H741 205 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 SLC25A37Q9NYZ2 338 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 SLAMF8Q9P0V8 285 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 IFT52Q9Y366 437 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 DSPPQ9NZW4 1301 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 DCHS2Q6V1P9 2916 aa16.38■□□□□ 0.21
SYNGR3-204ENST00000564642 IGHV3-15A0A0B4J1V0 119 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 CFAP73A6NFT4 308 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 C5orf58C9J3I9 102 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 SULT2B1O00204 365 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 ADAM11O75078 769 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 NUDT7P0C024 238 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 TROVE2P10155 538 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 HOXB9P17482 250 aaPredicted RBP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 CCNA2P20248 432 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 UGT2B10P36537 528 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 ZSWIM7Q19AV6 140 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 RPS26P11Q5JNZ5 115 aaPredicted RBP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 METTL21CQ5VZV1 264 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF836Q6ZNA1 936 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 TMPPEQ6ZT21 453 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 BEND4Q6ZU67 534 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 ADGRG3Q86Y34 549 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 TUSC5Q8IXB3 177 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 MED18Q9BUE0 208 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 KLHL4Q9C0H6 718 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 GP6Q9HCN6 339 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 A4GALTQ9NPC4 353 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 RLIMQ9NVW2 624 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 VAPAQ9P0L0 249 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 KLHL9Q9P2J3 617 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 LEF1Q9UJU2 399 aaPredicted RBP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 CORO2BQ9UQ03 480 aa16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 ZNF443Q9Y2A4 671 aaPredicted RBP16.37■□□□□ 0.21
SYNGR3-204ENST00000564642 SETD2Q9BYW2 2564 aaPredicted RBP16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 TMED7-TICAM2A0A0A6YYA0 188 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 CDHR4A6H8M9 788 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 EVPLLA8MZ36 301 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 FAAHO00519 579 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 YES1P07947 543 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 THBS1P07996 1170 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 BMP2P12643 396 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 DIO1P49895 249 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 POLR2HP52434 150 aaKnown RBP16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 EPS8Q12929 822 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 GCNT6Q5T4J0 391 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 PRAMEF8Q5VWM4 474 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 PRAMEF7Q5VXH5 474 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 CDC20BQ86Y33 519 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 MSRB3Q8IXL7 192 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 BBS10Q8TAM1 723 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 MAL2Q969L2 176 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 ZHX1-C8orf76Q96EF9 292 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 WFIKKN1Q96NZ8 548 aa16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 TACO1Q9BSH4 297 aaKnown RBP16.36■□□□□ 0.21
SYNGR3-204ENST00000564642 BCL2L10Q9HD36 194 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms