RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 DIRAS3O95661 229 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 MT-ATP6P00846 226 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CSF2P04141 144 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CA3P07451 260 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CCDC192P0DO97 292 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 RRASP10301 218 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 ARF4P18085 180 aaPredicted RBP2.7□□□□□ -1.98
UBR1-205ENST00000564540 NMT1P30419 496 aaKnown RBP2.7□□□□□ -1.98
UBR1-205ENST00000564540 CSNK1DP48730 415 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 HNMTP50135 292 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 HERVK_113P61574 105 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CEBPEQ15744 281 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 MAJINQ3KP22 176 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 HSP90AA5PQ58FG0 334 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 SLC25A24Q6NUK1 477 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CASC1Q6TDU7 716 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 OR51G1Q8NGK1 321 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 UCN3Q969E3 161 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 RAB7BQ96AH8 199 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 DTNBP1Q96EV8 351 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 RASL11BQ9BPW5 248 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 CRNKL1Q9BZJ0 848 aaKnown RBP2.7□□□□□ -1.98
UBR1-205ENST00000564540 NGBQ9NPG2 151 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 AIG1Q9NVV5 245 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 SOHLH2Q9NX45 425 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.7□□□□□ -1.98
UBR1-205ENST00000564540 ATP6V1HQ9UI12 483 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 ANAPC7Q9UJX3 599 aa2.7□□□□□ -1.98
UBR1-205ENST00000564540 UBE4BO95155 1302 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 SLITRK3O94933 977 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 CLUP10909 449 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 NCF1P14598 390 aaPredicted RBP2.69□□□□□ -1.98
UBR1-205ENST00000564540 MDH1P40925 334 aaKnown RBP2.69□□□□□ -1.98
UBR1-205ENST00000564540 IFNAR2P48551 515 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 MTTPP55157 894 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 ELP6Q0PNE2 266 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 CUL1Q13616 776 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 ATXN7L3Q14CW9 347 aaPredicted RBP2.69□□□□□ -1.98
UBR1-205ENST00000564540 RABGAP1LQ5R372 815 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 ANKRD37Q7Z713 158 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 LINC01551Q86U37 167 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 FAM71CQ8NEG0 241 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 DENND6BQ8NEG7 585 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 SHC3Q92529 594 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 KLHDC3Q9BQ90 382 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 NT5C3AQ9H0P0 336 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 RWDD1Q9H446 243 aaPredicted RBP2.69□□□□□ -1.98
UBR1-205ENST00000564540 RHOJQ9H4E5 214 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 COQ10BQ9H8M1 238 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 ACTR8Q9H981 624 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 AATFQ9NY61 560 aaKnown RBP eCLIP2.69□□□□□ -1.98
UBR1-205ENST00000564540 RNF6Q9Y252 685 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 CUX2O14529 1486 aa2.69□□□□□ -1.98
UBR1-205ENST00000564540 A0A096LNJ9 63 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 STX7O15400 261 aaKnown RBP2.68□□□□□ -1.98
UBR1-205ENST00000564540 OR10H3O60404 316 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 SNX4O95219 450 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 HSPA5P11021 654 aaKnown RBP2.68□□□□□ -1.98
UBR1-205ENST00000564540 RNH1P13489 461 aaKnown RBP2.68□□□□□ -1.98
UBR1-205ENST00000564540 ZNF823P16415 610 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 PBLDP30039 288 aaPredicted RBP2.68□□□□□ -1.98
UBR1-205ENST00000564540 PRPHP41219 470 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 ASMTP46597 345 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 LRRC74AQ0VAA2 488 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 CCDC173Q0VFZ6 552 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 GGTLC2Q14390 218 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 CASC10Q5T4H9 136 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 ACSM5Q6NUN0 579 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 LRRC31Q6UY01 552 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 RGS9BPQ6ZS82 235 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 PNKDQ8N490 385 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 GIPC3Q8TF64 312 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 TMEM158Q8WZ71 300 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 PKNOX2Q96KN3 472 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 PGLYRP4Q96LB8 373 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 OR2M2Q96R28 347 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 TESK2Q96S53 571 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 SLC30A2Q9BRI3 323 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 C6orf203Q9P0P8 240 aaPredicted RBP2.68□□□□□ -1.98
UBR1-205ENST00000564540 EXTL2Q9UBQ6 330 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 LAMP5Q9UJQ1 280 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 OARD1Q9Y530 152 aa2.68□□□□□ -1.98
UBR1-205ENST00000564540 IGHV3-64DA0A0J9YX35 117 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 ANKRD30BLA7E2S9 258 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 F8WDY8 70 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 KIF2AO00139 706 aaPredicted RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 PES1O00541 588 aaKnown RBP2.67□□□□□ -1.98
UBR1-205ENST00000564540 NBR2O15453 112 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 SSX5O60225 188 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 MOSP00540 346 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 AK1P00568 194 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 LALBAP00709 142 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 F10P00742 488 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 TSPY4P0CV99 314 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 TSPY10P0CW01 314 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 KRT13P13646 458 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 FUT1P19526 365 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 DPP4P27487 766 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 CCND2P30279 289 aa2.67□□□□□ -1.98
UBR1-205ENST00000564540 HMGN5P82970 282 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms