RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 CEP85LQ5SZL2 805 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 TYW3Q6IPR3 259 aaKnown RBP13.32□□□□□ -0.28
SPG7-210ENST00000564409 MTDHQ86UE4 582 aaKnown RBP13.32□□□□□ -0.28
SPG7-210ENST00000564409 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 PERPQ96FX8 193 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 Q96MF0 132 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 TRNT1Q96Q11 434 aaKnown RBP13.32□□□□□ -0.28
SPG7-210ENST00000564409 CENPHQ9H3R5 247 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 MARCOQ9UEW3 520 aaPredicted RBP13.32□□□□□ -0.28
SPG7-210ENST00000564409 HDGFL3Q9Y3E1 203 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 RNF115Q9Y4L5 304 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 CADP27708 2225 aa13.32□□□□□ -0.28
SPG7-210ENST00000564409 ABCA2Q9BZC7 2435 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 IGKV3D-15A0A087WSY6 115 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 A0A1W2PNR3 127 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 TRPC5OSA6NMA1 111 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 GPR171O14626 319 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 SMAD9O15198 467 aaKnown RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 ZNF500O60304 480 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 CD3EP07766 207 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 BGNP21810 368 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 KCNJ10P78508 379 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 GNA13Q14344 377 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 TAB1Q15750 504 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 ETFDHQ16134 617 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 MAPK14Q16539 360 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 FAM174BQ3ZCQ3 159 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 NCMAPQ5T1S8 102 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 HHATQ5VTY9 493 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 TNFAIP8L2Q6P589 184 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 DNAJC14Q6Y2X3 702 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 FRRS1Q6ZNA5 592 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 BHLHA15Q7RTS1 189 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 GRINAQ7Z429 371 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 GALNT5Q7Z7M9 940 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 CLEC4FQ8N1N0 589 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 ARFGAP2Q8N6H7 521 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 GLB1L3Q8NCI6 653 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 ZNF563Q8TA94 476 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 ZNF524Q96C55 264 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 MUCL1Q96DR8 90 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 ZBTB18Q99592 522 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 SLC35A5Q9BS91 424 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 CCDC106Q9BWC9 280 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 CHRNA9Q9UGM1 479 aa13.31□□□□□ -0.28
SPG7-210ENST00000564409 ING1Q9UK53 422 aaPredicted RBP13.31□□□□□ -0.28
SPG7-210ENST00000564409 ZNF814B7Z6K7 855 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 SLCO1B7G3V0H7 640 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 H7C1Q1 480 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 H6PDO95479 791 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 PMS2P2O95744 297 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 PLAUP00749 431 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 SLC18A1P54219 525 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 BST1Q10588 318 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 MPP2Q14168 576 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 GPAT3Q53EU6 434 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 C1QTNF12Q5T7M4 302 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 PIGXQ8TBF5 258 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 RAB3IL1Q8TBN0 382 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 PIWIL2Q8TC59 973 aaKnown RBP13.3□□□□□ -0.28
SPG7-210ENST00000564409 AKAP1Q92667 903 aaKnown RBP eCLIP13.3□□□□□ -0.28
SPG7-210ENST00000564409 RAB8BQ92930 207 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 FBXW5Q969U6 566 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 PANX1Q96RD7 426 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 QRSL1Q9H0R6 528 aaKnown RBP13.3□□□□□ -0.28
SPG7-210ENST00000564409 MTHFD2LQ9H903 347 aaPredicted RBP13.3□□□□□ -0.28
SPG7-210ENST00000564409 AIG1Q9NVV5 245 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 THAP1Q9NVV9 213 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.3□□□□□ -0.286e-6■■□□□ 13.3
SPG7-210ENST00000564409 TRAPPC4Q9Y296 219 aa13.3□□□□□ -0.28
SPG7-210ENST00000564409 V9GYY5 206 aaPredicted RBP13.3□□□□□ -0.28
SPG7-210ENST00000564409 NSD1Q96L73 2696 aaPredicted RBP13.3□□□□□ -0.28
SPG7-210ENST00000564409 IGHV3-15A0A0B4J1V0 119 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 CENPVL1A0A0U1RR11 272 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 CCDC154A6NI56 674 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 HMGN4O00479 90 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 FAAHO00519 579 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 SDHDO14521 159 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 HDAC3O15379 428 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 PGRP06401 933 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 TFPIP10646 304 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 UQCRBP14927 111 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 COX5AP20674 150 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 SLC16A1P53985 500 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 RPS4XP62701 263 aaKnown RBP13.29□□□□□ -0.28
SPG7-210ENST00000564409 CAPRIN1Q14444 709 aaKnown RBP13.29□□□□□ -0.28
SPG7-210ENST00000564409 TIMM23BQ5SRD1 257 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 ABLIM2Q6H8Q1 611 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 LRRC74BQ6ZQY2 392 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 ZNF100Q8IYN0 542 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 ZNF75CPQ92670 426 aaPredicted RBP13.29□□□□□ -0.28
SPG7-210ENST00000564409 TRMT61AQ96FX7 289 aaKnown RBP13.29□□□□□ -0.28
SPG7-210ENST00000564409 RADILQ96JH8 1075 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 OR52E6Q96RD3 313 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 SMR3AQ99954 134 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 PAIP2Q9BPZ3 127 aaKnown RBP13.29□□□□□ -0.28
SPG7-210ENST00000564409 PNPOQ9NVS9 261 aa13.29□□□□□ -0.28
SPG7-210ENST00000564409 HIVEP2P31629 2446 aa13.28□□□□□ -0.28
SPG7-210ENST00000564409 AGAP5A6NIR3 686 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms