RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 SLC25A43Q8WUT9 341 aaPredicted RBP21.12■□□□□ 0.97
NME3-206ENST00000564252 OIT3Q8WWZ8 545 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 RAB8BQ92930 207 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 DPY30Q9C005 99 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 TRIM2Q9C040 744 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 PCDHGB4Q9UN71 923 aa21.12■□□□□ 0.97
NME3-206ENST00000564252 PRSS51A0A1B0GVH4 220 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 KIAA1324LA8MWY0 1029 aaPredicted RBP21.11■□□□□ 0.97
NME3-206ENST00000564252 SULT2B1O00204 365 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 ANKRD28O15084 1053 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 AGR2O95994 175 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 IGHV1-2P23083 117 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 CSNK2A1P68400 391 aaPredicted RBP21.11■□□□□ 0.97
NME3-206ENST00000564252 PPP2R2BQ00005 443 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 KRTAP1-1Q07627 177 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 PPA1Q15181 289 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 STK11Q15831 433 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 CLEC12BQ2HXU8 276 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 PGGHGQ32M88 737 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 ANXA8L1Q5VT79 327 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 SAXO2Q658L1 398 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 TNFAIP8L2Q6P589 184 aaPredicted RBP21.11■□□□□ 0.97
NME3-206ENST00000564252 GALNT5Q7Z7M9 940 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 XAGE5Q8WWM1 108 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 TESCQ96BS2 214 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 TRMT61AQ96FX7 289 aaKnown RBP21.11■□□□□ 0.97
NME3-206ENST00000564252 CCDC106Q9BWC9 280 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 SAP130Q9H0E3 1048 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 POLE3Q9NRF9 147 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 SLC35A3Q9Y2D2 325 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 RAP2CQ9Y3L5 183 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 WDR45Q9Y484 360 aa21.11■□□□□ 0.97
NME3-206ENST00000564252 BIRC5O15392 142 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 CPSF4O95639 269 aaKnown RBP21.1■□□□□ 0.97
NME3-206ENST00000564252 MYZAPP0CAP1 466 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 CDKN1AP38936 164 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 APOBEC1P41238 236 aaKnown RBP21.1■□□□□ 0.97
NME3-206ENST00000564252 PLAURQ03405 335 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 ETFDHQ16134 617 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 ATAD3BQ5T9A4 648 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 FRRS1Q6ZNA5 592 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 ROPN1LQ96C74 230 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 ZG16BQ96DA0 208 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 SORT1Q99523 831 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 CTPS2Q9NRF8 586 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 NPAP1Q9NZP6 1156 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 LIPT1Q9Y234 373 aa21.1■□□□□ 0.97
NME3-206ENST00000564252 EPB41L3Q9Y2J2 1087 aaPredicted RBP21.1■□□□□ 0.97
NME3-206ENST00000564252 IGKV3D-15A0A087WSY6 115 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 A0A1W2PP18 115 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 PGM3O95394 542 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 THBS1P07996 1170 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 RPL14P50914 215 aaKnown RBP21.09■□□□□ 0.97
NME3-206ENST00000564252 VEZF1Q14119 521 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 CASP8Q14790 479 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 PDK3Q15120 406 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 KRT71Q3SY84 523 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 SPANXN4Q5MJ08 99 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 TIMM23BQ5SRD1 257 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 WDR93Q6P2C0 686 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 MTDHQ86UE4 582 aaKnown RBP21.09■□□□□ 0.97
NME3-206ENST00000564252 ZNF100Q8IYN0 542 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 ZNF433Q8N7K0 673 aaPredicted RBP21.09■□□□□ 0.97
NME3-206ENST00000564252 GTPBP3Q969Y2 492 aaKnown RBP21.09■□□□□ 0.97
NME3-206ENST00000564252 NEURL3Q96EH8 262 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 CHRNA9Q9UGM1 479 aa21.09■□□□□ 0.97
NME3-206ENST00000564252 SPIN1Q9Y657 262 aaPredicted RBP21.09■□□□□ 0.97
NME3-206ENST00000564252 PRAMEF27A3QJZ7 478 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 ZNF716A6NP11 495 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 SHISA9B4DS77 424 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 RNF223E7ERA6 249 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 RAMP1O60894 148 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 DHRS4L1P0CG22 281 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 GGT1P19440 569 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 IDUAP35475 653 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 SLC1A6P48664 564 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 KHKP50053 298 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 MREGQ8N565 214 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 MAPK1IP1LQ8NDC0 245 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 VPS37AQ8NEZ2 397 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 ZNF563Q8TA94 476 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 MUCL1Q96DR8 90 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 ARL5BQ96KC2 179 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 TRAF4Q9BUZ4 470 aaPredicted RBP21.08■□□□□ 0.97
NME3-206ENST00000564252 SSU72Q9NP77 194 aaKnown RBP21.08■□□□□ 0.97
NME3-206ENST00000564252 EMC3Q9P0I2 261 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 HAO1Q9UJM8 370 aa21.08■□□□□ 0.97
NME3-206ENST00000564252 SONP18583 2426 aaKnown RBP21.07■□□□□ 0.96
NME3-206ENST00000564252 GOLGA8QA0A0J9YX86 632 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 GOLGA8OA6NCC3 632 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 GOLGA8NF8WBI6 632 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 ADAM11O75078 769 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 SNUPNO95149 360 aaKnown RBP21.07■□□□□ 0.96
NME3-206ENST00000564252 PMS2P2O95744 297 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 CD8AP01732 235 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 C1QCP02747 245 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 TFPIP10646 304 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 RYKP34925 604 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 FAPQ12884 760 aa21.07■□□□□ 0.96
NME3-206ENST00000564252 DPY19L1Q2PZI1 675 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms