RNA–Protein interactions for RNA: ENST00000564060.5

CMTM3-207, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-207ENST00000564060 A6NNC1 897 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 EVPLLA8MZ36 301 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 C5orf58C9J3I9 102 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 ANGPT2O15123 496 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CTAG2O75638 210 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CGAP01215 116 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 POU2F1P14859 743 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 HOXB9P17482 250 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 KCNJ5P48544 419 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CSNK2A1P68400 391 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 DAZAP2Q15038 168 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 SYT14P1Q58G82 188 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 TMEM201Q5SNT2 666 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 RNF220Q5VTB9 566 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 FCRLAQ7L513 359 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 BBS10Q8TAM1 723 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 TSPEARQ8WU66 669 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CNOT9Q92600 299 aaKnown RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 TMEM19Q96HH6 336 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 OR5B2Q96R09 309 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CCDC106Q9BWC9 280 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 OPN3Q9H1Y3 402 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 SLC52A3Q9NQ40 469 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 CHRNA9Q9UGM1 479 aa17.76■□□□□ 0.43
CMTM3-207ENST00000564060 LEF1Q9UJU2 399 aaPredicted RBP17.76■□□□□ 0.43
CMTM3-207ENST00000564060 SH3D21A4FU49 640 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 CFAP73A6NFT4 308 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 BCAS1O75363 584 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-207ENST00000564060 PRKD3O94806 890 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 IDH2P48735 452 aaKnown RBP17.75■□□□□ 0.43
CMTM3-207ENST00000564060 CLK1P49759 484 aaKnown RBP17.75■□□□□ 0.43
CMTM3-207ENST00000564060 MAP2K6P52564 334 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 MAPK11Q15759 364 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 PAGE3Q5JUK9 113 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 FBXW10Q5XX13 1052 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 ROBO4Q8WZ75 1007 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF524Q96C55 264 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 SRXN1Q9BYN0 137 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 BCL2L10Q9HD36 194 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 PLSCR4Q9NRQ2 329 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 SLC25A37Q9NYZ2 338 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 KLHL9Q9P2J3 617 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 CLEC4AQ9UMR7 237 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF443Q9Y2A4 671 aaPredicted RBP17.75■□□□□ 0.43
CMTM3-207ENST00000564060 NDUFAF1Q9Y375 327 aa17.75■□□□□ 0.43
CMTM3-207ENST00000564060 ANKRD17O75179 2603 aaKnown RBP17.75■□□□□ 0.43
CMTM3-207ENST00000564060 A0A1W2PNR3 127 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 CDHR4A6H8M9 788 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 CASKO14936 926 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 AGTR1P30556 359 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 POLR2HP52434 150 aaKnown RBP17.74■□□□□ 0.43
CMTM3-207ENST00000564060 KRTAP10-9P60411 292 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 GCNT6Q5T4J0 391 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF474Q6S9Z5 364 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF836Q6ZNA1 936 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF550Q7Z398 422 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 CDH24Q86UP0 819 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF610Q8N9Z0 462 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 LINC01560Q8TB33 94 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZHX1-C8orf76Q96EF9 292 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 TMEM120AQ9BXJ8 343 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 POLDIP3Q9BY77 421 aaKnown RBP17.74■□□□□ 0.43
CMTM3-207ENST00000564060 CLEC4MQ9H2X3 399 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-207ENST00000564060 ZNF385DQ9H6B1 395 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 CTPS2Q9NRF8 586 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 RASSF1Q9NS23 344 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 VAPAQ9P0L0 249 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 KLHL13Q9P2N7 655 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.74■□□□□ 0.43
CMTM3-207ENST00000564060 EDARQ9UNE0 448 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 HDGFL3Q9Y3E1 203 aa17.74■□□□□ 0.43
CMTM3-207ENST00000564060 LRBAP50851 2863 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 FAM221AA4D161 298 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 SULT2B1O00204 365 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 DNPH1O43598 174 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 TFPIP10646 304 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 ETS2P15036 469 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 ENPP1P22413 925 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 SLC1A3P43003 542 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 DIO1P49895 249 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 COPZ1P61923 177 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 PLAURQ03405 335 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 EPS8Q12929 822 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 RPS26P11Q5JNZ5 115 aaPredicted RBP17.73■□□□□ 0.43
CMTM3-207ENST00000564060 TMPPEQ6ZT21 453 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 BEND4Q6ZU67 534 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 VRK2Q86Y07 508 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 ABHD3Q8WU67 409 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 SLC35B4Q969S0 331 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 GPATCH1Q9BRR8 931 aaKnown RBP17.73■□□□□ 0.43
CMTM3-207ENST00000564060 SPATA9Q9BWV2 254 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 SLAMF8Q9P0V8 285 aa17.73■□□□□ 0.43
CMTM3-207ENST00000564060 TRBV5-3A0A0A0MS03 114 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 C16orf97H3BN30 126 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 ATP8B1O43520 1251 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 PMS2P2O95744 297 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 VIMP08670 466 aaKnown RBP17.72■□□□□ 0.43
CMTM3-207ENST00000564060 ARAFP10398 606 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 UGT2B10P36537 528 aa17.72■□□□□ 0.43
CMTM3-207ENST00000564060 FAM27E3Q08E93 113 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms