RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 RAMP2O60895 175 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 PDYNP01213 254 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 UBBP0CG47 229 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 UBCP0CG48 685 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 ANXA7P20073 488 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 AGAP20933 346 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 MAPK3P27361 379 aaPredicted RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 RBP2P50120 134 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 RAB2AP61019 212 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 PPIAP62937 165 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 RPS27AP62979 156 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 UBA52P62987 128 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 ZNF177Q13360 481 aaPredicted RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 ARSIQ5FYB1 569 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 PYY3Q5JQD4 70 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 CTSL3PQ5NE16 218 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 TMEM71Q6P5X7 295 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 SBSNQ6UWP8 590 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 VITQ6UXI7 678 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 UNQ6494/PRO21346Q6UXR6 183 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 REC114Q7Z4M0 266 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 ZNF383Q8NA42 475 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 FAM98AQ8NCA5 519 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 HAVCR2Q8TDQ0 301 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 THEM6Q8WUY1 208 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 FGF11Q92914 225 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 HLA-CQ95604 372 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 SLAMF9Q96A28 289 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 KCTD12Q96CX2 325 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 HS6ST2Q96MM7 605 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 JAM3Q9BX67 310 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 WDR13Q9H1Z4 485 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 CACYBPQ9HB71 228 aaKnown RBP8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 MYOFQ9NZM1 2061 aa8.5□□□□□ -1.05
AC138869.3-201ENST00000563960 LRRN3E7EW58 273 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 FFAR1O14842 300 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 SLC25A12O75746 678 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 LATS1O95835 1130 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ACTL6AO96019 429 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ACP2P11117 423 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ETFAP13804 333 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 PKMP14618 531 aaKnown RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RPA2P15927 270 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 MGMTP16455 207 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 HOXD9P28356 352 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RPL3P39023 403 aaKnown RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 GDNFP39905 211 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CCR9P51686 369 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 PNLIPRP2P54317 469 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 AP1S1P61966 158 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 MESP2Q0VG99 397 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RAB40BQ12829 278 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 GINS1Q14691 196 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RNF219Q5W0B1 726 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 SFXN4Q6P4A7 337 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 LINGO4Q6UY18 593 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 OR2W3Q7Z3T1 314 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 DPPA2Q7Z7J5 298 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 OR6V1Q8N148 313 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RNASE11Q8TAA1 199 aaKnown RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 SUSD6Q92537 303 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 IRF7Q92985 503 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 APIPQ96GX9 242 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 NAA11Q9BSU3 229 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RSRP1Q9BUV0 290 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 TM6SF2Q9BZW4 377 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 LRRN3Q9H3W5 708 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 HRASLSQ9HDD0 168 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 MRPS18AQ9NVS2 196 aaKnown RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ENPP4Q9Y6X5 453 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 F5P12259 2224 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 OBSL1O75147 1896 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 A0A0A6YYC8 382 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 C1orf226A1L170 272 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 URADA6NGE7 173 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 IQCF5A8MTL0 148 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ZNF879B4DU55 563 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 I3L1I5 382 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 PRAMEF11O60813 436 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CLDN11O75508 207 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 KRT33AO76009 404 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 UQCRC2P22695 453 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 SHC1P29353 583 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CD70P32970 193 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 RNF144AP50876 292 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CDH4P55283 916 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 POU4F2Q12837 409 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 GAB1Q13480 694 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ZNF235Q14590 738 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CPSF6Q16630 551 aaKnown RBP eCLIP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 SLC25A30Q5SVS4 291 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 FAM69AQ5T7M9 428 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ASTLQ6HA08 431 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 CXorf57Q6NSI4 855 aaKnown RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ESPNLQ6ZVH7 1005 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 TGIF2LXQ8IUE1 241 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 ZNF561Q8N587 486 aa8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 HJURPQ8NCD3 748 aaPredicted RBP8.49□□□□□ -1.05
AC138869.3-201ENST00000563960 FBXO15Q8NCQ5 510 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms