RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 ADAP00813 363 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 ADSLP30566 484 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 DIO1P49895 249 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 ANXA11P50995 505 aaKnown RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 NR1H2P55055 460 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 CAPRIN1Q14444 709 aaKnown RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 SYT14P1Q58G82 188 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 SHEQ5VZ18 495 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 C20orf204Q6ZNR8 217 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 LSRQ86X29 649 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 GABRG1Q8N1C3 465 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 FAM71CQ8NEG0 241 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 KISS1RQ969F8 398 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 PRSS50Q9UI38 385 aa15.71■□□□□ 0.11
NME3-205ENST00000563854 SPIN1Q9Y657 262 aaPredicted RBP15.71■□□□□ 0.11
NME3-205ENST00000563854 FLNAP21333 2647 aaKnown RBP15.7■□□□□ 0.1
NME3-205ENST00000563854 HEATR5AQ86XA9 2040 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 CHRM4P08173 479 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 NR2F1P10589 423 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 CSNK2A1P68400 391 aaPredicted RBP15.7■□□□□ 0.1
NME3-205ENST00000563854 KCNJ10P78508 379 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 SLC9B1Q4ZJI4 515 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 COX20Q5RI15 118 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 SLC25A43Q8WUT9 341 aaPredicted RBP15.7■□□□□ 0.1
NME3-205ENST00000563854 CNOT9Q92600 299 aaKnown RBP15.7■□□□□ 0.1
NME3-205ENST00000563854 PIP5K1AQ99755 562 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 SMR3AQ99954 134 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 SAP130Q9H0E3 1048 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 MANSC1Q9H8J5 431 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 GP6Q9HCN6 339 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 CHRNA9Q9UGM1 479 aa15.7■□□□□ 0.1
NME3-205ENST00000563854 SLCO1B7G3V0H7 640 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 RFXANKO14593 260 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 AP3D1O14617 1153 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 CLOCKO15516 846 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 CYTIPO60759 359 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 DNAJA2O60884 412 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 LYZL6O75951 148 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 ANP32DO95626 131 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 IDO1P14902 403 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 FOSL1P15407 271 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 APOBEC1P41238 236 aaKnown RBP15.69■□□□□ 0.1
NME3-205ENST00000563854 IDH2P48735 452 aaKnown RBP15.69■□□□□ 0.1
NME3-205ENST00000563854 STK11Q15831 433 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 SFRP5Q5T4F7 317 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 TMPPEQ6ZT21 453 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 Q71RC1 249 aaPredicted RBP15.69■□□□□ 0.1
NME3-205ENST00000563854 RAB3IL1Q8TBN0 382 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 WDR60Q8WVS4 1066 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 OIT3Q8WWZ8 545 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 ZHX1-C8orf76Q96EF9 292 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 C18orf12Q96KH6 178 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 TRNT1Q96Q11 434 aaKnown RBP15.69■□□□□ 0.1
NME3-205ENST00000563854 CCDC106Q9BWC9 280 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 HDHD5Q9BXW7 423 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 OR11A1Q9GZK7 315 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 OR10A4Q9H209 315 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 SLC38A1Q9H2H9 487 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 BCO1Q9HAY6 547 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 TMBIM4Q9HC24 238 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 ING1Q9UK53 422 aaPredicted RBP15.69■□□□□ 0.1
NME3-205ENST00000563854 LIPT1Q9Y234 373 aa15.69■□□□□ 0.1
NME3-205ENST00000563854 ACANP16112 2415 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 ZNF469Q96JG9 3925 aaPredicted RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 ZNF814B7Z6K7 855 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 SLC22A3O75751 556 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 GUSBP08236 651 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 EDNRAP25101 427 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 PLAURQ03405 335 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 LRRC74AQ0VAA2 488 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 TAB1Q15750 504 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 PDCD4Q53EL6 469 aaKnown RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 BHLHA15Q7RTS1 189 aaPredicted RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 GRINAQ7Z429 371 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 MAVSQ7Z434 540 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 YTHDF3Q7Z739 585 aaKnown RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 ZNF100Q8IYN0 542 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 LRRC75A-AS1Q8N1F1 130 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 GLB1L3Q8NCI6 653 aaPredicted RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 AKAP1Q92667 903 aaKnown RBP eCLIP15.68■□□□□ 0.1
NME3-205ENST00000563854 TLCD1Q96CP7 247 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 ARL5BQ96KC2 179 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 Q96MF0 132 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 OR52B2Q96RD2 323 aa15.68■□□□□ 0.1
NME3-205ENST00000563854 EXOSC3Q9NQT5 275 aaKnown RBP15.68■□□□□ 0.1
NME3-205ENST00000563854 AGAP5A6NIR3 686 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 HS3ST1O14792 307 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 ADAM11O75078 769 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 KRT75O95678 551 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 IGHV3-9P01782 118 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 INHBBP09529 407 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 IL7RP16871 459 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 CRATP43155 626 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 OR3A2P47893 321 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 OR2B6P58173 313 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 ITGADQ13349 1161 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 GNA13Q14344 377 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 P2RY6Q15077 328 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 LRRC74BQ6ZQY2 392 aa15.67■□□□□ 0.1
NME3-205ENST00000563854 Q6ZT83 130 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms