RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 FRRS1Q6ZNA5 592 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 OLIG3Q7RTU3 272 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 CROCCP2Q86T23 111 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 ANKRD46Q86W74 232 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF619Q8N2I2 560 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 RAB3IL1Q8TBN0 382 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 PIWIL2Q8TC59 973 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 AKAP1Q92667 903 aaKnown RBP eCLIP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 RAB8BQ92930 207 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 OR5B2Q96R09 309 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 NUF2Q9BZD4 464 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 ESRP2Q9H6T0 727 aaKnown RBP15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 RNF115Q9Y4L5 304 aa15.26■□□□□ 0.03
VPS9D1-203ENST00000563798 OVOL3O00110 214 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 DNPH1O43598 174 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 CPSF4O95639 269 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 COX5AP20674 150 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 S100A3P33764 101 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 KHKP50053 298 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 KCNJ10P78508 379 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 PLAURQ03405 335 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 LRRC74AQ0VAA2 488 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 MERTKQ12866 999 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 TSC22D1Q15714 1073 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 ABLIM2Q6H8Q1 611 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 TNFAIP8L2Q6P589 184 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 GALNT5Q7Z7M9 940 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 MTDHQ86UE4 582 aaKnown RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 ZG16BQ96DA0 208 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 SLC35A5Q9BS91 424 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 PNPOQ9NVS9 261 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 AIG1Q9NVV5 245 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 MARCOQ9UEW3 520 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 LIPT1Q9Y234 373 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 SPIN1Q9Y657 262 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 V9GYY5 206 aaPredicted RBP15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 FREM1Q5H8C1 2179 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 PRR14LQ5THK1 2151 aa15.25■□□□□ 0.03
VPS9D1-203ENST00000563798 TRIM64A6NGJ6 449 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 TRIM64BA6NI03 449 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 SULT2B1O00204 365 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 HMGN4O00479 90 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 BCAS1O75363 584 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CYP7B1O75881 506 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 PGM3O95394 542 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 PMS2P2O95744 297 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CD3EP07766 207 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 ALDOCP09972 364 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 DANCRP0C864 163 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CASP9P55211 416 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 BST1Q10588 318 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CAPRIN1Q14444 709 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 FAM174BQ3ZCQ3 159 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 Q71RC1 249 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 BHLHA15Q7RTS1 189 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 GRINAQ7Z429 371 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 SPATA19Q7Z5L4 167 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 P2RY8Q86VZ1 359 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CMIPQ8IY22 773 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 PMM1Q92871 262 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 TEX37Q96LM6 180 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 TRNT1Q96Q11 434 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF300Q96RE9 604 aaPredicted RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 CHRNA9Q9UGM1 479 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 PRSS50Q9UI38 385 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 PRDM4Q9UKN5 801 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 HDGFL3Q9Y3E1 203 aa15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 FN1P02751 2386 aaKnown RBP15.24■□□□□ 0.03
VPS9D1-203ENST00000563798 GOLGA8QA0A0J9YX86 632 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 GOLGA8OA6NCC3 632 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF716A6NP11 495 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 GOLGA8NF8WBI6 632 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 FAAHO00519 579 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 SDHDO14521 159 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 ZNF500O60304 480 aaPredicted RBP15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 ADAM11O75078 769 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 FESP07332 822 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 THBS1P07996 1170 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 EDNRAP25101 427 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 CHI3L1P36222 383 aaPredicted RBP15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 MAGEA8P43361 318 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 SLC16A1P53985 500 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 CHRNEQ04844 493 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 TIMM23BQ5SRD1 257 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 CEP85LQ5SZL2 805 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 ADGRG3Q86Y34 549 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 FBXW5Q969U6 566 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 KCNK9Q9NPC2 374 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 CTPS2Q9NRF8 586 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 EMC3Q9P0I2 261 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 TRAPPC4Q9Y296 219 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 GPR45Q9Y5Y3 372 aa15.23■□□□□ 0.03
VPS9D1-203ENST00000563798 DPRXA6NFQ7 191 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 CCDC154A6NI56 674 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 AGAP5A6NIR3 686 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 PGRP06401 933 aa15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 RPS4Y1P22090 263 aaKnown RBP15.22■□□□□ 0.03
VPS9D1-203ENST00000563798 IGHV1-2P23083 117 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms