RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 RPS25P62851 125 aaKnown RBP17.52■□□□□ 0.4
SMPD3-203ENST00000563226 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMPD3-203ENST00000563226 SKP2Q13309 424 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 PLK5Q496M5 336 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 FAAH2Q6GMR7 532 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 GID4Q8IVV7 300 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 SLC38A9Q8NBW4 561 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 SECISBP2Q96T21 854 aaKnown RBP17.52■□□□□ 0.4
SMPD3-203ENST00000563226 MESP1Q9BRJ9 268 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 DUSP23Q9BVJ7 150 aa17.52■□□□□ 0.4
SMPD3-203ENST00000563226 C2orf92A0A1B0GVN3 265 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 C17orf51A8MQB3 221 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 J3QRE1 110 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 TSPAN19P0C672 248 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 CLUP10909 449 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 RPS19P39019 145 aaKnown RBP17.52■□□□□ 0.39
SMPD3-203ENST00000563226 CCR4P51679 360 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 ATP1A4Q13733 1029 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 PRPF38BQ5VTL8 546 aaKnown RBP17.52■□□□□ 0.39
SMPD3-203ENST00000563226 MEPCEQ7L2J0 689 aaKnown RBP17.52■□□□□ 0.39
SMPD3-203ENST00000563226 CYB561A3Q8NBI2 242 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 SLC37A3Q8NCC5 494 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 ARHGAP9Q9BRR9 750 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 RERGLQ9H628 205 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 ERVK13-1Q9NX77 482 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 FBXL4Q9UKA2 621 aa17.52■□□□□ 0.39
SMPD3-203ENST00000563226 FAM86C2PA6NEL3 165 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 CCDC182A6NF36 153 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SCDO00767 359 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 ICOSLGO75144 302 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SULT1C4O75897 302 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 UBL4AP11441 157 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 HPGDP15428 266 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 ATP6V1E1P36543 226 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 GPR143P51810 404 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 COPZ1P61923 177 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 CRMP1Q14194 572 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 GXYLT1Q4G148 440 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 KLHL12Q53G59 568 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 OR9Q1Q8NGQ5 310 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SYNDIG1Q9H7V2 258 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 MKKSQ9NPJ1 570 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 TOR4AQ9NXH8 423 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 QPCTLQ9NXS2 382 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 TNFRSF10DQ9UBN6 386 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 ICAM5Q9UMF0 924 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 CFL2Q9Y281 166 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SF3B6Q9Y3B4 125 aaKnown RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 A3GALT2U3KPV4 340 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 IGKV1D-42A0A075B6H8 117 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 IGHV3-20A0A0C4DH32 117 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 PLD2O14939 933 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 PNLIPP16233 465 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 MST1P26927 711 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 ADH7P40394 386 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 NR0B1P51843 470 aaKnown RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 TPBGQ13641 420 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 YOD1Q5VVQ6 348 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 GDPGP1Q6ZNW5 385 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 MAML2Q8IZL2 1156 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 TMEM99Q8N816 258 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF527Q8NB42 609 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 OR14A16Q8NHC5 309 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 DNAJA4Q8WW22 397 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SGTBQ96EQ0 304 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 OR6C1Q96RD1 312 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 BARHL1Q9BZE3 327 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 HOXD1Q9GZZ0 328 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 TXNL4BQ9NX01 149 aaKnown RBP17.51■□□□□ 0.39
SMPD3-203ENST00000563226 SSR3Q9UNL2 185 aa17.51■□□□□ 0.39
SMPD3-203ENST00000563226 WDR87Q6ZQQ6 2873 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 PRR23D1E9PI22 279 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF670-ZNF695F2Z2N8 137 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 TOX3O15405 576 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-203ENST00000563226 REM1O75628 298 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 CFIP05156 583 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 PRR23D2P0DMB1 279 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-203ENST00000563226 SLC6A6P31641 620 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 ZXDAP98168 799 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 RHBDD2Q6NTF9 364 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 RTL4Q6ZR62 310 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 DCDC5Q6ZRR9 648 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 CENPSQ8N2Z9 138 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 SPRYD4Q8WW59 207 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-203ENST00000563226 DAZLQ92904 295 aaKnown RBP17.5■□□□□ 0.39
SMPD3-203ENST00000563226 TBX5Q99593 518 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 TM9SF2Q99805 663 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 WWTR1Q9GZV5 400 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 OR51V1Q9H2C8 321 aa17.5■□□□□ 0.39
SMPD3-203ENST00000563226 IGHV5-10-1A0A0J9YXX1 117 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 MCIDASD6RGH6 385 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 GMFGO60234 142 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF12P17014 697 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 TGM4P49221 684 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 SLITRK4Q8IW52 837 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 ZNF440Q8IYI8 595 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 KLHL36Q8N4N3 616 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 EID2Q8N6I1 236 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 PSD4Q8NDX1 1056 aa17.49■□□□□ 0.39
SMPD3-203ENST00000563226 OR5M3Q8NGP4 307 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms