RNA–Protein interactions for RNA: ENST00000562872.1

KLHDC4-209, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-209ENST00000562872 CCDC154A6NI56 674 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 GJE1A6NN92 205 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 HS3ST1O14792 307 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 SMAD7O15105 426 aaKnown RBP9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 CYTIPO60759 359 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 LYZL6O75951 148 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 LY6G6DO95868 133 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 FPR1P21462 350 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 EPHA3P29320 983 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 S100A3P33764 101 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 NTF4P34130 210 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 CHI3L1P36222 383 aaPredicted RBP9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 DIO1P49895 249 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 RAC3P60763 192 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 MAPK11Q15759 364 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 ANXA8L1Q5VT79 327 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 OGFOD2Q6N063 350 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 CLEC9AQ6UXN8 241 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 EIF3MQ7L2H7 374 aaKnown RBP9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 MAVSQ7Z434 540 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 MGARPQ8TDB4 240 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 ST8SIA1Q92185 356 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 AKAP1Q92667 903 aaKnown RBP eCLIP9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 REXO5Q96IC2 774 aaKnown RBP9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 CCDC106Q9BWC9 280 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 SAP130Q9H0E3 1048 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 SLC38A1Q9H2H9 487 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 TIGARQ9NQ88 270 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 GPR45Q9Y5Y3 372 aa9.79□□□□□ -0.84
KLHDC4-209ENST00000562872 DSCAMO60469 2012 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 USF3Q68DE3 2245 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 TMEM120BA0PK00 339 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 ARHGEF9O43307 516 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 SNNO75324 88 aaPredicted RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 SOX30O94993 753 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 IGHV3-9P01782 118 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 SOD3P08294 240 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 PABPC4LP0CB38 370 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 KITP10721 976 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 CCNA2P20248 432 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 IGHV1-2P23083 117 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 OR3A2P47893 321 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 KHKP50053 298 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 CLNS1AP54105 237 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 NR1H2P55055 460 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 FOXG1P55316 489 aaPredicted RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 RASGEF1BQ0VAM2 473 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 CAPRIN1Q14444 709 aaKnown RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 GPAT3Q53EU6 434 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 SYT14P1Q58G82 188 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 ATAD3BQ5T9A4 648 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 HHATQ5VTY9 493 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 GTF2IRD2BQ6EKJ0 949 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 ABLIM2Q6H8Q1 611 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 DNAJC14Q6Y2X3 702 aaPredicted RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 TMPPEQ6ZT21 453 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 BHLHA15Q7RTS1 189 aaPredicted RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 GTF2IRD2Q86UP8 949 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 STEAP2Q8NFT2 490 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 KBTBD8Q8NFY9 601 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 KISS1RQ969F8 398 aaPredicted RBP9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 GSX2Q9BZM3 304 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 OR10A4Q9H209 315 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 GP6Q9HCN6 339 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 EXD2Q9NVH0 621 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 NPAP1Q9NZP6 1156 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 KLHL9Q9P2J3 617 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 BTNL2Q9UIR0 455 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 PCDHGB4Q9UN71 923 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 DNHD1Q96M86 4753 aa9.78□□□□□ -0.84
KLHDC4-209ENST00000562872 ZC3H12DA2A288 527 aaKnown RBP9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 DPRXA6NFQ7 191 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 ZNF716A6NP11 495 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 CLOCKO15516 846 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 PGRP06401 933 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 GUSBP08236 651 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 PGCP20142 388 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 RPS4Y1P22090 263 aaKnown RBP9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 IL32P24001 234 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 IDH2P48735 452 aaKnown RBP9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 MVDP53602 400 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 KCNJ10P78508 379 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 STK11Q15831 433 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 GTDC1Q4AE62 458 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 SLC9B1Q4ZJI4 515 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 NCMAPQ5T1S8 102 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 AP1ARQ63HQ0 302 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 ADAM5Q6NVV9 412 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 Q6ZT83 130 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 ADGRG3Q86Y34 549 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 CCDC103Q8IW40 242 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 SLC43A2Q8N370 569 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 ZNF611Q8N823 705 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 POLE3Q9NRF9 147 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 ZNF701Q9NV72 531 aaPredicted RBP9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 CHRNA9Q9UGM1 479 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 SLC35A3Q9Y2D2 325 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 RNF115Q9Y4L5 304 aa9.77□□□□□ -0.85
KLHDC4-209ENST00000562872 IGKV3D-15A0A087WSY6 115 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms