RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 NFYCQ13952 458 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 GNA13Q14344 377 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 CAPRIN1Q14444 709 aaKnown RBP13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 PDSS1Q5T2R2 415 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 RNF220Q5VTB9 566 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 PRAMEF8Q5VWM4 474 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 PRAMEF7Q5VXH5 474 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 BBS10Q8TAM1 723 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 ANKRD27Q96NW4 1050 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 CGREF1Q99674 301 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 RBM24Q9BX46 236 aaKnown RBP13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 OPN3Q9H1Y3 402 aaPredicted RBP13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 PIGMQ9H3S5 423 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 FREM1Q5H8C1 2179 aa13.76□□□□□ -0.21
CCNDBP1-203ENST00000562553 CFAP73A6NFT4 308 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 EVPLLA8MZ36 301 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 C5orf58C9J3I9 102 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 SMNDC1O75940 238 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 PABPC4LP0CB38 370 aaKnown RBP13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 KLK2P20151 261 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 SLC7A1P30825 629 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 CPA2P48052 419 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 CDK6Q00534 326 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 LARS2Q15031 903 aaKnown RBP13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 ADRM1Q16186 407 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 GRINAQ7Z429 371 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 DNAJA3Q96EY1 480 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 LURAP1Q96LR2 239 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 OR5B2Q96R09 309 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 SPATA9Q9BWV2 254 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 GALNT8Q9NY28 637 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 CORO2BQ9UQ03 480 aa13.75□□□□□ -0.21
CCNDBP1-203ENST00000562553 IGHV3-15A0A0B4J1V0 119 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 A8MXE2 369 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 FAAHO00519 579 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 MSTNO14793 375 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 FRS3O43559 492 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SS18L1O75177 396 aaPredicted RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 CGAP01215 116 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 PRG2P13727 222 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 CCNA2P20248 432 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 APOBEC1P41238 236 aaKnown RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ACAA2P42765 397 aaKnown RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 KRTAP10-9P60411 292 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 TLE4Q04727 773 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SCARB2Q14108 478 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SYT14P1Q58G82 188 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ZNF311Q5JNZ3 666 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 REP15Q6BDI9 236 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 REEP3Q6NUK4 255 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ZNF474Q6S9Z5 364 aaPredicted RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 FAM214BQ7L5A3 538 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SERPINA11Q86U17 422 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 COMTD1Q86VU5 262 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SNX32Q86XE0 403 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ADGRG3Q86Y34 549 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 PTOV1Q86YD1 416 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 RNF128Q8TEB7 428 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ABHD3Q8WU67 409 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 CPNE4Q96A23 557 aaPredicted RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 C14orf79Q96F83 325 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 LRRC46Q96FV0 321 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 GMPPAQ96IJ6 420 aaPredicted RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SLC39A3Q9BRY0 314 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 OR11A1Q9GZK7 315 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 TMEM38AQ9H6F2 299 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 SERINC1Q9NRX5 453 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 CRIM1Q9NZV1 1036 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 ARMCX1Q9P291 453 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 FOXD3Q9UJU5 478 aaPredicted RBP13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 OSGIN1Q9UJX0 560 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 IFT52Q9Y366 437 aa13.74□□□□□ -0.21
CCNDBP1-203ENST00000562553 TEP1Q99973 2627 aaKnown RBP13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TMED7-TICAM2A0A0A6YYA0 188 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TMEM72A0PK05 275 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 FXYD1O00168 92 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 PLGP00747 810 aaPredicted RBP13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ETS2P15036 469 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ENPP1P22413 925 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TACR3P29371 465 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 AQP1P29972 269 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 SSTR2P30874 369 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 CPOXP36551 454 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 KIR2DL3P43628 341 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 SEC24CP53992 1094 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 GYS2P54840 703 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 MYBPHQ13203 477 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TRMT5Q32P41 509 aaKnown RBP13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 EEF1A1P5Q5VTE0 462 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 FCRLAQ7L513 359 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ZZZ3Q8IYH5 903 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ZNF440Q8IYI8 595 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 SLC25A43Q8WUT9 341 aaPredicted RBP13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ARL5BQ96KC2 179 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 CACYBPQ9HB71 228 aaKnown RBP13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TIGARQ9NQ88 270 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 KCNN3Q9UGI6 736 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 ZNF232Q9UNY5 417 aa13.73□□□□□ -0.21
CCNDBP1-203ENST00000562553 TMED7Q9Y3B3 224 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms