RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 SYT4Q9H2B2 425 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 OR52A5Q9H2C5 316 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 C1orf198Q9H425 327 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 PRDM13Q9H4Q3 707 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 SFXN1Q9H9B4 322 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 LMAN1LQ9HAT1 526 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 GAR1Q9NY12 217 aaKnown RBP6.75□□□□□ -1.33
CDH1-203ENST00000561751 NLGN3Q9NZ94 848 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 DNAJC27Q9NZQ0 273 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 PPT2Q9UMR5 302 aa6.75□□□□□ -1.33
CDH1-203ENST00000561751 CHTOPQ9Y3Y2 248 aaKnown RBP6.75□□□□□ -1.33
CDH1-203ENST00000561751 ZNF638Q14966 1978 aaKnown RBP6.75□□□□□ -1.33
CDH1-203ENST00000561751 A0A0G2JK05 382 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 NPEPPSL1A6NEC2 478 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GGT3PA6NGU5 568 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TMEM200CA6NKL6 621 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TRDCB7Z8K6 153 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PRRG1O14668 218 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TOX3O15405 576 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 FFAR2O15552 330 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 MBTPS2O43462 519 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RNF13O43567 381 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GMFGO60234 142 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PCDH7O60245 1069 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TSPAN3O60637 253 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GGCTO75223 188 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 BEST1O76090 585 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 AKR7A3O95154 331 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 MBP02144 154 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 WNT1P04628 370 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ATP1B1P05026 303 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 HCKP08631 526 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ANKRD34CP0C6C1 535 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 METTL15P1P0C7V9 234 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 APEHP13798 732 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 AMD1P17707 334 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ADCYAP1P18509 176 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 SDC1P18827 310 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 IFNGR2P38484 337 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RBM34P42696 430 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 SRP9P49458 86 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 SEMG2Q02383 582 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TOMM34Q15785 309 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 SPDYE7PQ495Y7 208 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 SIRPB2Q5JXA9 342 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 UBE2NLQ5JXB2 153 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RIPPLY2Q5TAB7 128 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 MARC1Q5VT66 337 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GLT8D1Q68CQ7 371 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TSSK4Q6SA08 328 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 SMARCD3Q6STE5 483 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 C17orf99Q6UX52 265 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TMIGD1Q6UXZ0 262 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 CERS6Q6ZMG9 384 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GPRIN1Q7Z2K8 1008 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ZNF546Q86UE3 836 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 CIR1Q86X95 450 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 VRK3Q8IV63 474 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RNF149Q8NC42 400 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 OR2L5Q8NG80 312 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 OR10Q1Q8NGQ4 319 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 OR13C3Q8NGS6 347 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 OR13D1Q8NGV5 346 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 BBS10Q8TAM1 723 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 CD200R1Q8TD46 325 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 BRIX1Q8TDN6 353 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 C2CD4CQ8TF44 421 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 FCAMRQ8WWV6 532 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GATAD2BQ8WXI9 593 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 SLAMF9Q96A28 289 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RRNAD1Q96FB5 475 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 RBM18Q96H35 190 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 ZNF668Q96K58 619 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 GPR21Q99679 349 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 CDC6Q99741 560 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 NRIP2Q9BQI9 281 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PBX4Q9BYU1 374 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 BHLHE41Q9C0J9 482 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 SLC39A8Q9C0K1 460 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PRO3102Q9H379 93 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 SMDT1Q9H4I9 107 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ACKR4Q9NPB9 350 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 MRPL17Q9NRX2 175 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 WWOXQ9NZC7 414 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PTGFRNQ9P2B2 879 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 GULP1Q9UBP9 304 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 UPB1Q9UBR1 384 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ZNF69Q9UC07 566 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 TNFSF18Q9UNG2 199 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 ANGPT4Q9Y264 503 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 RUVBL1Q9Y265 456 aaKnown RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 RASD1Q9Y272 281 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 PCYT1BQ9Y5K3 369 aaPredicted RBP6.74□□□□□ -1.33
CDH1-203ENST00000561751 ANK1P16157 1881 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 DENND4AQ7Z401 1863 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 COL6A3P12111 3177 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 CITO14578 2027 aa6.74□□□□□ -1.33
CDH1-203ENST00000561751 A0A087WUJ7 227 aa6.73□□□□□ -1.33
CDH1-203ENST00000561751 FXYD6-FXYD2A0A087WZ82 144 aa6.73□□□□□ -1.33
CDH1-203ENST00000561751 A0A087X0M5 115 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms