RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 SMAD9O15198 467 aaKnown RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 CYTIPO60759 359 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 SMPD2O60906 423 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ADAM11O75078 769 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ADAP00813 363 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 GSNP06396 782 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 FOSL1P15407 271 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 FPR1P21462 350 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 RYKP34925 604 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 APOBEC1P41238 236 aaKnown RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 DIO1P49895 249 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 PLAURQ03405 335 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 RASGEF1BQ0VAM2 473 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 TSC22D1Q15714 1073 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 SLC9B1Q4ZJI4 515 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 BEX5Q5H9J7 111 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 COX20Q5RI15 118 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 BEND6Q5SZJ8 279 aaPredicted RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 SFRP5Q5T4F7 317 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ATG16L1Q676U5 607 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 NXNQ6DKJ4 435 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 TMPPEQ6ZT21 453 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 WFDC8Q8IUA0 241 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 TRIML2Q8N7C3 387 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ANKFN1Q8N957 763 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 RAB3IL1Q8TBN0 382 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ZNF75CPQ92670 426 aaPredicted RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 S100PBPQ96BU1 408 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 TLCD1Q96CP7 247 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 PLPPR2Q96GM1 343 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 MAELQ96JY0 434 aaKnown RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 TRNT1Q96Q11 434 aaKnown RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 ZBTB18Q99592 522 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 CCL19Q99731 98 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 PSD2Q9BQI7 771 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 CCDC106Q9BWC9 280 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 TMBIM4Q9HC24 238 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 CTPS2Q9NRF8 586 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.14□□□□□ -0.95
CLK3-205ENST00000561673 NKIRAS1Q9NYS0 192 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 KLHL9Q9P2J3 617 aa9.14□□□□□ -0.95
CLK3-205ENST00000561673 AGAP5A6NIR3 686 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 RFXANKO14593 260 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 SLC22A3O75751 556 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 PLAUP00749 431 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 IL6P05231 212 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 CHRM4P08173 479 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 IDO1P14902 403 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 EDNRAP25101 427 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 IDH2P48735 452 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 HPCAP84074 193 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 LRRC74AQ0VAA2 488 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 PDCD4Q53EL6 469 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 SYT14P1Q58G82 188 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 SHEQ5VZ18 495 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 ALKBH2Q6NS38 261 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 C20orf204Q6ZNR8 217 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 LRRC74BQ6ZQY2 392 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 MAVSQ7Z434 540 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 ADGRG3Q86Y34 549 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 LRRC75A-AS1Q8N1F1 130 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 ARFGAP2Q8N6H7 521 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 GLB1L3Q8NCI6 653 aaPredicted RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 STEAP2Q8NFT2 490 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 ZNF563Q8TA94 476 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 PNPT1Q8TCS8 783 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 CNOT9Q92600 299 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 ZNF300Q96RE9 604 aaPredicted RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 TACO1Q9BSH4 297 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 SLC38A1Q9H2H9 487 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 MTHFD2LQ9H903 347 aaPredicted RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 EXOSC3Q9NQT5 275 aaKnown RBP9.13□□□□□ -0.95
CLK3-205ENST00000561673 SLC6A13Q9NSD5 602 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 CHRNA9Q9UGM1 479 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 LIPT1Q9Y234 373 aa9.13□□□□□ -0.95
CLK3-205ENST00000561673 ZNF724A8MTY0 619 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 SULT2B1O00204 365 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 AP3D1O14617 1153 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 ARHGEF9O43307 516 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 ERLIN1O75477 346 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 FESP07332 822 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 NR2F1P10589 423 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 TFPIP10646 304 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 RPS4Y1P22090 263 aaKnown RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 IL32P24001 234 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 OR3A2P47893 321 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 NR1H2P55055 460 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 CSNK2A1P68400 391 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 TXNL4AP83876 142 aaKnown RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 ITGADQ13349 1161 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 P2RY6Q15077 328 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 MAPK11Q15759 364 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 GSTA3Q16772 222 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 ZNF704Q6ZNC4 412 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 Q6ZT83 130 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 GRINAQ7Z429 371 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 MTDHQ86UE4 582 aaKnown RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 LSRQ86X29 649 aaPredicted RBP9.12□□□□□ -0.95
CLK3-205ENST00000561673 P3H2Q8IVL5 708 aa9.12□□□□□ -0.95
CLK3-205ENST00000561673 CMIPQ8IY22 773 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms