RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 GTDC1Q4AE62 458 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 SYT14P1Q58G82 188 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 CXorf67Q86X51 503 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 WFDC8Q8IUA0 241 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 ARFGAP2Q8N6H7 521 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 CNOT9Q92600 299 aaKnown RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 TRNT1Q96Q11 434 aaKnown RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 PSD2Q9BQI7 771 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 CCDC106Q9BWC9 280 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 FANCFQ9NPI8 374 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 CTPS2Q9NRF8 586 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 SDR39U1Q9NRG7 319 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 SERINC1Q9NRX5 453 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 ZIM2Q9NZV7 527 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 KLHL9Q9P2J3 617 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 ING1Q9UK53 422 aaPredicted RBP15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 USH1CQ9Y6N9 552 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 NF1P21359 2839 aa15.3■□□□□ 0.04
CDC42BPB-208ENST00000561271 UBDO15205 165 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 GCM2O75603 506 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 IL6P05231 212 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 NR2F1P10589 423 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 TFPIP10646 304 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 PPP3CBP16298 524 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 DIO1P49895 249 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 RIPPLY3P57055 190 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 ADAM8P78325 824 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 GSTA3Q16772 222 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 LRRC74BQ6ZQY2 392 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 GABRG1Q8N1C3 465 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 SLC43A2Q8N370 569 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 WFDC11Q8NEX6 87 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 SLC25A43Q8WUT9 341 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 WDR60Q8WVS4 1066 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 AURKBQ96GD4 344 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 ZNF300Q96RE9 604 aaPredicted RBP15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 GP6Q9HCN6 339 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 EXOSC3Q9NQT5 275 aaKnown RBP15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 CHRNA9Q9UGM1 479 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 LIPT1Q9Y234 373 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 TLN2Q9Y4G6 2542 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 ZFHX3Q15911 3703 aa15.29■□□□□ 0.04
CDC42BPB-208ENST00000561271 NAV3Q8IVL0 2385 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 AGAP5A6NIR3 686 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 SULT2B1O00204 365 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 CYTIPO60759 359 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 ANP32DO95626 131 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 KRT75O95678 551 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 YES1P07947 543 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 ETFAP13804 333 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 PSMB1P20618 241 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 RPS4Y1P22090 263 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 EDNRAP25101 427 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 MVDP53602 400 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 TXNL4AP83876 142 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 RASGEF1BQ0VAM2 473 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 MAPK11Q15759 364 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 TTMPQ5BVD1 217 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 AP1ARQ63HQ0 302 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 ALKBH2Q6NS38 261 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 GRINAQ7Z429 371 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 KRTAP1-3Q8IUG1 177 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 VPS33AQ96AX1 596 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 S100PBPQ96BU1 408 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 OR11A1Q9GZK7 315 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 BCO1Q9HAY6 547 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 SLCO1B3Q9NPD5 702 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 BEX4Q9NWD9 120 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 GPR52Q9Y2T5 361 aa15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 SPIN1Q9Y657 262 aaPredicted RBP15.28■□□□□ 0.04
CDC42BPB-208ENST00000561271 KLF4O43474 513 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 CCNA2P20248 432 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 APOBEC1P41238 236 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 IDH2P48735 452 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 POLR2JP52435 117 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 BEX5Q5H9J7 111 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 C6orf10Q5SRN2 563 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 MRPL2Q5T653 305 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 ABLIM2Q6H8Q1 611 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 EPGNQ6UW88 154 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 TMPPEQ6ZT21 453 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 CMIPQ8IY22 773 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 MIER2Q8N344 545 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 ZNF775Q96BV0 537 aaPredicted RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 ARL5BQ96KC2 179 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 C7orf26Q96N11 449 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 TACO1Q9BSH4 297 aaKnown RBP15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 P2RX2Q9UBL9 471 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 PRSS50Q9UI38 385 aa15.27■□□□□ 0.04
CDC42BPB-208ENST00000561271 CR1P17927 2039 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 NSD1Q96L73 2696 aaPredicted RBP15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 BCHEP06276 602 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 DBIP07108 87 aaKnown RBP15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 IL7RP16871 459 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 IL32P24001 234 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 CRATP43155 626 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 OR3A2P47893 321 aa15.26■□□□□ 0.03
CDC42BPB-208ENST00000561271 DSTNP60981 165 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms