RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 FCN3O75636 299 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CBR3O75828 277 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 WISP2O76076 250 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 B3GAT3O94766 335 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 BAG4O95429 457 aaKnown RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 LDOC1O95751 146 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 TSPAN15O95858 294 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FADS2O95864 444 aaKnown RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 F10P00742 488 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CA1P00915 261 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 IGHA1P01876 353 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 HLA-HP01893 362 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 EDN1P05305 212 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 GLAP06280 429 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 C2P06681 752 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 NGFRP08138 427 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FAM157CP0CG43 387 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PRSS56P0CW18 603 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FGF5P12034 268 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CDH1P12830 882 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 DPEP1P16444 411 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ITGA2P17301 1181 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 POLR2EP19388 210 aaKnown RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 C4BPBP20851 252 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 EDNRAP25101 427 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 LMO1P25800 156 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 HTR2CP28335 458 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 MPGP29372 298 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FGF9P31371 208 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 GPR183P32249 361 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 MMP12P39900 470 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ELK3P41970 407 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 RBM34P42696 430 aaKnown RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 OR3A2P47893 321 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CDC34P49427 236 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 TMED10P49755 219 aaKnown RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 SLC26A2P50443 739 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ARHGDIBP52566 201 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 UBE2KP61086 200 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 VBP1P61758 197 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CSNK1G2P78368 415 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 OC90Q02509 493 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 IRF8Q02556 426 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SRSF1Q07955 248 aaKnown RBP eCLIP1.79□□□□□ -2.12
RTF1-207ENST00000561076 RIPPLY1Q0D2K3 151 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SCRN3Q0VDG4 424 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 EFEMP1Q12805 493 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 KLRB1Q12918 225 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FOXI1Q12951 378 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 GAGE5Q13069 117 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 GAGE6Q13070 117 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 GPR17Q13304 367 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 C1orf61Q13536 156 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PIGHQ14442 188 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 ITIH4Q14624 930 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 GNMTQ14749 295 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SLC17A1Q14916 467 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SNCBQ16143 134 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SLC15A2Q16348 729 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PSMD5Q16401 504 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PSG3Q16557 428 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 NDUFA9Q16795 377 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 C18orf21Q32NC0 220 aaPredicted RBP1.79□□□□□ -2.12
RTF1-207ENST00000561076 SPANXN4Q5MJ08 99 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 WSCD1Q658N2 575 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ZNF470Q6ECI4 717 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PRR5LQ6MZQ0 368 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PRMT9Q6P2P2 845 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 RFWD3Q6PCD5 774 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 TRIM65Q6PJ69 517 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SPESP1Q6UW49 350 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ATRAIDQ6UW56 229 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 TMEM207Q6UWW9 146 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FAM151BQ6UXP7 276 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 TMPRSS11AQ6ZMR5 421 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 LEKR1Q6ZMV7 388 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ZNF600Q6ZNG1 722 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 MOB2Q70IA6 237 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ARCQ7LC44 396 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 NIPA1Q7RTP0 329 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 HDDC2Q7Z4H3 204 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 DCXRQ7Z4W1 244 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CMC1Q7Z7K0 106 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 ZNF546Q86UE3 836 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 PIM3Q86V86 326 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 RNF130Q86XS8 419 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 BBS7Q8IWZ6 715 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SLC7A5P1Q8MH63 180 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SPEM1Q8N4L4 309 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 RAB42Q8N4Z0 105 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 TRAM1L1Q8N609 369 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 FAM86B1Q8N7N1 296 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 MAPKAPK5-AS1Q8N8E1 139 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 C15orf54Q8N8G6 183 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 POC1AQ8NBT0 407 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 OR5L2Q8NGL0 311 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 OR1K1Q8NGR3 316 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 LYPD6BQ8NI32 183 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 SLC7A13Q8TCU3 470 aa1.79□□□□□ -2.12
RTF1-207ENST00000561076 CXorf40AQ8TE69 158 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms