RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 C11orf65Q8NCR3 313 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 NAXEQ8NCW5 288 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 HIPK4Q8NE63 616 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 MBD3L2Q8NHZ7 208 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 FNDC9Q8TBE3 224 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ROBO4Q8WZ75 1007 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 DNAJA3Q96EY1 480 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 UCN2Q96RP3 112 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 CPPED1Q9BRF8 314 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC39A3Q9BRY0 314 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 SPATA9Q9BWV2 254 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 IKZF5Q9H5V7 419 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 TMEM38AQ9H6F2 299 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 NANOGQ9H9S0 305 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 EFCAB1Q9HAE3 211 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 BCL2L10Q9HD36 194 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 EXOSC3Q9NQT5 275 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 CTPS2Q9NRF8 586 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 KLHL28Q9NXS3 571 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 DNAJB12Q9NXW2 375 aaKnown RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 ANGPT4Q9Y264 503 aa8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 SPIN1Q9Y657 262 aaPredicted RBP8.11□□□□□ -1.11
SNRPA1-214ENST00000560987 HEATR5AQ86XA9 2040 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SPTBN1Q01082 2364 aaKnown RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 TRBV5-3A0A0A0MS03 114 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 TMED7-TICAM2A0A0A6YYA0 188 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 CDHR4A6H8M9 788 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 PRORSD1PA6NEY8 169 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 C19orf84I3L1E1 186 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 M0QX08 132 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SULT2B1O00204 365 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ADAMDEC1O15204 470 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC22A2O15244 555 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 THBS1P07996 1170 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 FCGR2AP12318 317 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 BMP2P12643 396 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ETS2P15036 469 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 HOXB9P17482 250 aaPredicted RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 RPS4Y1P22090 263 aaKnown RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 PSMA4P25789 261 aaKnown RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ELK4P28324 431 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SHC1P29353 583 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 CPA2P48052 419 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 KCNJ5P48544 419 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 POLR2HP52434 150 aaKnown RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 OR2B6P58173 313 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 HOXC5Q00444 222 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 RBBP4Q09028 425 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 EPS8Q12929 822 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SELENBP1Q13228 472 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SELPLGQ14242 412 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 TRMT5Q32P41 509 aaKnown RBP8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC25A53Q5H9E4 307 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 C3orf33Q6P1S2 294 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 GRINAQ7Z429 371 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 LUZP2Q86TE4 346 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 GGNQ86UU5 652 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ARMC8Q8IUR7 673 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 C10orf111Q8N326 155 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF524Q96C55 264 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 DDIT4LQ96D03 193 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 RCN3Q96D15 328 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 CMTM5Q96DZ9 223 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ZFP3Q96NJ6 502 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 SELENONQ9NZV5 590 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 CLCF1Q9UBD9 225 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 CLEC4AQ9UMR7 237 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 TMED7Q9Y3B3 224 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 ZNF175Q9Y473 711 aa8.1□□□□□ -1.11
SNRPA1-214ENST00000560987 NCOA6Q14686 2063 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 IGHV3-15A0A0B4J1V0 119 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SYT5O00445 386 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 FRS3O43559 492 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SNX3O60493 162 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 AQP8O94778 261 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 PRKD3O94806 890 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 IL18BPO95998 194 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 ENPP1P22413 925 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 FKBP2P26885 142 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 TACR3P29371 465 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC1A3P43003 542 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 ASCL1P50553 236 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 NCALDP61601 193 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 CSNK2A1P68400 391 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SNTB1Q13884 538 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 ADRM1Q16186 407 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 RABL3Q5HYI8 236 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 INTS11Q5TA45 600 aaKnown RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 RNF220Q5VTB9 566 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 WBP2NLQ6ICG8 309 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 ADGRE4PQ86SQ3 457 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SERPINA11Q86U17 422 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 ADGRG3Q86Y34 549 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 KIF18BQ86Y91 864 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC30A8Q8IWU4 369 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SMYD1Q8NB12 490 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 RELL2Q8NC24 303 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 FAM71CQ8NEG0 241 aa8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 BHLHE22Q8NFJ8 381 aaPredicted RBP8.09□□□□□ -1.11
SNRPA1-214ENST00000560987 SLC25A43Q8WUT9 341 aaPredicted RBP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms