RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CLDND2Q8NHS1 167 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 MS4A6EQ96DS6 147 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 FBXO17Q96EF6 278 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 APIPQ96GX9 242 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZNF479Q96JC4 524 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PANX3Q96QZ0 392 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 OR4K3Q96R72 315 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PCBD2Q9H0N5 130 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 BEX1Q9HBH7 125 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PLAC1Q9HBJ0 212 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 CCDC177Q9NQR7 707 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 SMYD2Q9NRG4 433 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 PAPOLBQ9NRJ5 636 aaKnown RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 FAM114A2Q9NRY5 505 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TAB2Q9NYJ8 693 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 TREM2Q9NZC2 230 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SELENONQ9NZV5 590 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 MSRB1Q9NZV6 116 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZIM2Q9NZV7 527 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 ZNF69Q9UC07 566 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 POU2F3Q9UKI9 436 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 DAPP1Q9UN19 280 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 MGAT4BQ9UQ53 548 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SOX21Q9Y651 276 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 SIRT4Q9Y6E7 314 aaPredicted RBP3.2□□□□□ -1.9
HERC1-211ENST00000560983 SPACA6W5XKT8 324 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 SCN3AQ9NY46 2000 aa3.2□□□□□ -1.9
HERC1-211ENST00000560983 C2orf92A0A1B0GVN3 265 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 URADA6NGE7 173 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 OR6C76A6NM76 312 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 WASHC1A8K0Z3 465 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 SEC14L5O43304 696 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ZBTB14O43829 449 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 FGF17O60258 216 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 CST8O60676 142 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 UGT2B11O75310 529 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 NIPSNAP2O75323 286 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 PRKRAO75569 313 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 PLGP00747 810 aaPredicted RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 TMEM225BP0DP42 221 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 FCGR2AP12318 317 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 NAGAP17050 411 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 DDX5P17844 614 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 ABCD3P28288 659 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 AGTR1P30556 359 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 RPL22P35268 128 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 IDH3GP51553 393 aaPredicted RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 GAS1P54826 345 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 SLC12A2P55011 1212 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 CTBP2P56545 445 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 HERVK_113P63132 956 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ERVK-8P63133 956 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 RPP38P78345 283 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 RAE1P78406 368 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 SLAMF1Q13291 335 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 NAE1Q13564 534 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 STK11Q15831 433 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 PPP1R3AQ16821 1122 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 TOR1AIP1Q5JTV8 583 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ASPHD1Q5U4P2 390 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 OR5M10Q6IEU7 315 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 AGTRAPQ6RW13 159 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 AFTPHQ6ULP2 937 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 LCTLQ6UWM7 567 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 MFSD7Q6UXD7 560 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 NUP54Q7Z3B4 507 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 LUZP1Q86V48 1076 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 P2RY8Q86VZ1 359 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 RFX6Q8HWS3 928 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 KLHDC8AQ8IYD2 350 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ZNF615Q8N8J6 731 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 TRPV3Q8NET8 790 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 OR8K1Q8NGG5 319 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 OR4F5Q8NH21 305 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 SGCDQ92629 289 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 MUCL1Q96DR8 90 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 DTNBP1Q96EV8 351 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 SNF8Q96H20 258 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 RBM18Q96H35 190 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 ADGRG7Q96K78 797 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 QKIQ96PU8 341 aaKnown RBP eCLIP3.19□□□□□ -1.9
HERC1-211ENST00000560983 ALS2CR12Q96Q35 445 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 OSBPL11Q9BXB4 747 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ERVK-6Q9BXR3 956 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 METTL7AQ9H8H3 244 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 MOV10Q9HCE1 1003 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 SLC52A3Q9NQ40 469 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 GLRX2Q9NS18 164 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ABHD10Q9NUJ1 306 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 C1RLQ9NZP8 487 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 ERVK-19Q9WJR5 959 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 MRPS33Q9Y291 106 aaKnown RBP3.19□□□□□ -1.9
HERC1-211ENST00000560983 SLC25A15Q9Y619 301 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 KMT2AQ03164 3969 aa3.19□□□□□ -1.9
HERC1-211ENST00000560983 DYNC1H1Q14204 4646 aaKnown RBP3.18□□□□□ -1.9
HERC1-211ENST00000560983 A0A0G2JMP0 313 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 A0A0X1KG70 313 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 OR2M5A3KFT3 312 aa3.18□□□□□ -1.9
HERC1-211ENST00000560983 OR5H1A6NKK0 313 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms