RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 SDC1P18827 310 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 TGFBR3Q03167 851 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 SYT14P1Q58G82 188 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 RNF165Q6ZSG1 346 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 R3HCC1LQ7Z5L2 792 aaKnown RBP16.22■□□□□ 0.19
TPM1-226ENST00000560959 CCNYL1Q8N7R7 359 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 PSMA8Q8TAA3 256 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 PIGXQ8TBF5 258 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 ACMSDQ8TDX5 336 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 ADAMTS15Q8TE58 950 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 HPS1Q92902 700 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 CHMP6Q96FZ7 201 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 C1orf159Q96HA4 380 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 BOD1Q96IK1 185 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 C1QTNF6Q9BXI9 259 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 SLC17A5Q9NRA2 495 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 FBXO9Q9UK97 447 aaPredicted RBP16.22■□□□□ 0.19
TPM1-226ENST00000560959 TMED5Q9Y3A6 229 aa16.22■□□□□ 0.19
TPM1-226ENST00000560959 NPIPA5A0A0B4J1W7 369 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 NPIPA7E9PJI5 369 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 AKAP10O43572 662 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 URI1O94763 535 aaPredicted RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 PMS2P2O95744 297 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 NPIPA8P0DM63 369 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 ITGA2P17301 1181 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 PAX7P23759 505 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 NTF4P34130 210 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 ASMTP46597 345 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 SESN3P58005 492 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 SNRPD2P62316 118 aaKnown RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 NDUFAF6Q330K2 333 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 C8orf74Q6P047 294 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 UGT2A3Q6UWM9 527 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 FRMD7Q6ZUT3 714 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 HOMEZQ8IX15 550 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 RFWD2Q8NHY2 731 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 C3orf49Q96BT1 292 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 ZMYND19Q96E35 227 aaPredicted RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 FBXO17Q96EF6 278 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 TSSK3Q96PN8 268 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 THUMPD3Q9BV44 507 aaKnown RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 NMUR2Q9GZQ4 415 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 C12orf65Q9H3J6 166 aaKnown RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 ACER3Q9NUN7 267 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 PARPBPQ9NWS1 579 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 TMEFF2Q9UIK5 374 aaPredicted RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 FAF1Q9UNN5 650 aaPredicted RBP16.21■□□□□ 0.19
TPM1-226ENST00000560959 TRAF6Q9Y4K3 522 aa16.21■□□□□ 0.19
TPM1-226ENST00000560959 SERINC4A6NH21 518 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 GIFP27352 417 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 APOBEC1P41238 236 aaKnown RBP16.2■□□□□ 0.18
TPM1-226ENST00000560959 CLK1P49759 484 aaKnown RBP16.2■□□□□ 0.18
TPM1-226ENST00000560959 SKP2Q13309 424 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 ZSWIM7Q19AV6 140 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 TMCO5AQ8N6Q1 288 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 OR56A1Q8NGH5 318 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 BHLHE41Q9C0J9 482 aaPredicted RBP16.2■□□□□ 0.18
TPM1-226ENST00000560959 BPESC1Q9GZL8 116 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 QRSL1Q9H0R6 528 aaKnown RBP16.2■□□□□ 0.18
TPM1-226ENST00000560959 DCDC2Q9UHG0 476 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 HDGFL3Q9Y3E1 203 aa16.2■□□□□ 0.18
TPM1-226ENST00000560959 SPIN1Q9Y657 262 aaPredicted RBP16.2■□□□□ 0.18
TPM1-226ENST00000560959 ARFGEF3Q5TH69 2177 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 B9A039 149 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 G3V2L1 256 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 PDE5AO76074 875 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 WNT11O96014 354 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 TACSTD2P09758 323 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 NEFHP12036 1026 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 PGCP20142 388 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 SERPINF1P36955 418 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 MAGEA8P43361 318 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
TPM1-226ENST00000560959 COMPP49747 757 aaPredicted RBP16.19■□□□□ 0.18
TPM1-226ENST00000560959 CCR4P51679 360 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 FOXG1P55316 489 aaPredicted RBP16.19■□□□□ 0.18
TPM1-226ENST00000560959 DNAJB13P59910 316 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 PRPS1P60891 318 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 H3F3AP84243 136 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 MERTKQ12866 999 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 ZNF141Q15928 474 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 RFTN2Q52LD8 501 aaPredicted RBP16.19■□□□□ 0.18
TPM1-226ENST00000560959 ZYG11AQ6WRX3 759 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 NATD1Q8N6N6 113 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 ZNF614Q8N883 585 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 SGMS2Q8NHU3 365 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 SDF2Q99470 211 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 FMO2Q99518 471 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 SOX7Q9BT81 388 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 TNFRSF12AQ9NP84 129 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 GPATCH2Q9NW75 528 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 BAIAP2L1Q9UHR4 511 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 ATP6V1HQ9UI12 483 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 KCNE3Q9Y6H6 103 aa16.19■□□□□ 0.18
TPM1-226ENST00000560959 HEATR1Q9H583 2144 aaKnown RBP16.18■□□□□ 0.18
TPM1-226ENST00000560959 EXOC1LA0A1B0GW35 172 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 ATP6V1G2-DDX39BF2Z307 99 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 ANKRD28O15084 1053 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 MYL2P10916 166 aa16.18■□□□□ 0.18
TPM1-226ENST00000560959 PCMT1P22061 227 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms