RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 P2RY8Q86VZ1 359 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ZNF433Q8N7K0 673 aaPredicted RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 OR52N5Q8NH56 324 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 SGMS2Q8NHU3 365 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 ZNF483Q8TF39 744 aaPredicted RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 STON2Q8WXE9 905 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 UTP4Q969X6 686 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 APIPQ96GX9 242 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 REXO5Q96IC2 774 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 BBS4Q96RK4 519 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 MRPL57Q9BQC6 102 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 INPP5KQ9BT40 448 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 MRPL46Q9H2W6 279 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 GLIPR2Q9H4G4 154 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 EQTNQ9NQ60 294 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 PNPOQ9NVS9 261 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 MRTO4Q9UKD2 239 aaKnown RBP8.7□□□□□ -1.02
TPM1-225ENST00000560679 MGAT4BQ9UQ53 548 aa8.7□□□□□ -1.02
TPM1-225ENST00000560679 GNG14A0A1W2PPG7 69 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 LRP5LA4QPB2 252 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 C9JVG2 144 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 MANBAO00462 879 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZNF195O14628 629 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 OIP5O43482 229 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 SLITRK5O94991 958 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 OR4F21O95013 312 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 KCNH1O95259 989 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 DDCP20711 480 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 PTAFRP25105 342 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 IDH3AP50213 366 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 CDH13P55290 713 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZNF117Q03924 483 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 HEPACAMQ14CZ8 416 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZNHIT3Q15649 155 aaPredicted RBP8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZSWIM7Q19AV6 140 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 SWI5Q1ZZU3 235 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 PDLIM3Q53GG5 364 aaPredicted RBP8.69□□□□□ -1.02
TPM1-225ENST00000560679 KLC3Q6P597 504 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 SSX8Q7RTT4 187 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 TMEM151AQ8N4L1 468 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 CDYL2Q8N8U2 506 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 FAM110BQ8TC76 370 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZFP90Q8TF47 636 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZFAND2BQ8WV99 257 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZNF775Q96BV0 537 aaPredicted RBP8.69□□□□□ -1.02
TPM1-225ENST00000560679 ZNF524Q96C55 264 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 ELP4Q96EB1 424 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 AMDHD1Q96NU7 426 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 FOXN4Q96NZ1 517 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 BPESC1Q9GZL8 116 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 TIGARQ9NQ88 270 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 KLHL9Q9P2J3 617 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 TAGLN3Q9UI15 199 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 SNX6Q9UNH7 406 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 STK38LQ9Y2H1 464 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 RAP2CQ9Y3L5 183 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 TRAF6Q9Y4K3 522 aa8.69□□□□□ -1.02
TPM1-225ENST00000560679 M0R1B8 84 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 NPHS1O60500 1241 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 CYTIPO60759 359 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 NKX2-2O95096 273 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SNUPNO95149 360 aaKnown RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 OTCP00480 354 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 IGHV3-9P01782 118 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 RBP1P09455 135 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 ACP2P11117 423 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 HSD3B1P14060 373 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 ATP5F1P24539 256 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 HSD3B2P26439 372 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SERPINB5P36952 375 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SRP14P37108 136 aaKnown RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 FOXG1P55316 489 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 DNAJB13P59910 316 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SLC25A3Q00325 362 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 CHRNEQ04844 493 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 TOMM34Q15785 309 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 TMEM176BQ3YBM2 270 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 SPIN4Q56A73 249 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 ARL13AQ5H913 290 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 CFAP157Q5JU67 520 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 GALNT18Q6P9A2 607 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 CBLN3Q6UW01 205 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 TREML1Q86YW5 311 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SLC43A2Q8N370 569 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 ZNF781Q8N8C0 355 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 FBXO27Q8NI29 283 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 FBXO30Q8TB52 745 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 CCDC126Q96EE4 140 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 EBF4Q9BQW3 602 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 BTBD10Q9BSF8 475 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 CCDC106Q9BWC9 280 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 SHCBP1LQ9BZQ2 653 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 NMRK1Q9NWW6 199 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 ARMCX1Q9P291 453 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 BAIAP2L1Q9UHR4 511 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
TPM1-225ENST00000560679 FKBP7Q9Y680 259 aa8.68□□□□□ -1.02
TPM1-225ENST00000560679 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms