RNA–Protein interactions for RNA: ENST00000560467.1

LDLR-212, Transcript of low density lipoprotein receptor, humanhuman

TSL 3

Gene LDLR, Length 928 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-212ENST00000560467 HMGN2P46Q86SG4 172 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 AMIGO2Q86SJ2 522 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 CD163Q86VB7 1156 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 HIPK1Q86Z02 1210 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 LINC00471Q8N535 108 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 FAM86B1Q8N7N1 296 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 FAM98AQ8NCA5 519 aaKnown RBP10.72□□□□□ -0.69
LDLR-212ENST00000560467 MCHR1Q99705 422 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 ARHGDIGQ99819 225 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 PKP2Q99959 881 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 KLHL4Q9C0H6 718 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 SEMA6AQ9H2E6 1030 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 ZNF556Q9HAH1 456 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 TIMMDC1Q9NPL8 285 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 CNIH4Q9P003 139 aa10.72□□□□□ -0.69
LDLR-212ENST00000560467 TESQ9UGI8 421 aaKnown RBP10.72□□□□□ -0.69
LDLR-212ENST00000560467 NKX2-6A6NCS4 301 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 PRAMEF25A6NGN4 478 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NPIPB9F8W1W9 429 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 M0R3H8 397 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 HCRTR2O43614 444 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 SNX4O95219 450 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 GADD45GO95257 159 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 ANGPTL1O95841 491 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 H1F0P07305 194 aaKnown RBP10.71□□□□□ -0.69
LDLR-212ENST00000560467 IGFBP2P18065 325 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 PGCP20142 388 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 VHLP40337 213 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 SOX3P41225 446 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 HLCSP50747 726 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 CCR4P51679 360 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 ART1P52961 327 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 CRYBA2P53672 197 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 CDH12P55289 794 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 FBXW4P57775 412 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 VLDLRP98155 873 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 CBFBQ13951 182 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 MAPK14Q16539 360 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NTRK2Q16620 822 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NRF1Q16656 503 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 SLC30A6Q6NXT4 461 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 C16orf47Q6ZP98 133 aaPredicted RBP10.71□□□□□ -0.69
LDLR-212ENST00000560467 PACS2Q86VP3 889 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 ARMC10Q8N2F6 343 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 CLIP4Q8N3C7 705 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 GPR32P1Q8NGA4 272 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 ZNF563Q8TA94 476 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NRGNQ92686 78 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 SLC38A4Q969I6 547 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NRBF2Q96F24 287 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 C7orf34Q96L11 122 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 EPYCQ99645 322 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 AMBRA1Q9C0C7 1298 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 LAT2Q9GZY6 243 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 PTGES2Q9H7Z7 377 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 EXOSC3Q9NQT5 275 aaKnown RBP10.71□□□□□ -0.69
LDLR-212ENST00000560467 RLIMQ9NVW2 624 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 NDUFAF4Q9P032 175 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 PPP4R1LQ9P1A2 415 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 KIF17Q9P2E2 1029 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 HRH3Q9Y5N1 445 aa10.71□□□□□ -0.69
LDLR-212ENST00000560467 SCN2AQ99250 2005 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 A0A1B0GTH9 108 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TRAPPC13A5PLN9 417 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TMEM200CA6NKL6 621 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TFECO14948 347 aaPredicted RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 SCO2O43819 266 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 OR5F1O95221 314 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 SEMG1P04279 462 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TPOP07202 933 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 THRBP10828 461 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 CDH2P19022 906 aaPredicted RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 RYKP34925 604 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 YAP1P46937 504 aaKnown RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 PTDSS1P48651 473 aaKnown RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 MASP1P48740 699 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 MEOX1P50221 254 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TRAM2Q15035 370 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 TAF11Q15544 211 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 ZNF791Q3KP31 576 aaPredicted RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 FGD3Q5JSP0 725 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 DCST1Q5T197 706 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 ZAR1Q86SH2 424 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 MARCH3Q86UD3 253 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 CDK20Q8IZL9 346 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 CYP4Z2PQ8N1L4 340 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 CADM2Q8N3J6 435 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 RPRMLQ8N4K4 120 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 OR6T1Q8NGN1 323 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 OR5K1Q8NHB7 308 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 B4GALNT2Q8NHY0 566 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 FAM57AQ8TBR7 257 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 DNAJA4Q8WW22 397 aaPredicted RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 TMEM234Q8WY98 164 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 CNOT9Q92600 299 aaKnown RBP10.7□□□□□ -0.7
LDLR-212ENST00000560467 PRRC1Q96M27 445 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 UCK2Q9BZX2 261 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 ANKRD19PQ9H560 264 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 SACM1LQ9NTJ5 587 aa10.7□□□□□ -0.7
LDLR-212ENST00000560467 COQ3Q9NZJ6 369 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms